Protein Alignment pb and Barhl2

DIOPT Version :10

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: NP_075245.1
• Gene: Barhl2 / 65050
• RGDID: 620726
• Length: 384
• Species: Rattus norvegicus
• Alignment Length: 304
• Identity: 72/304 - (23%)
• Similarity: 110/304 - (36%)
• Gaps: 119/304 - (39%)

  Fly     5 CSSLDTTSMGTQIKSESPLNPLQVQTGQTSLPVGGCGGAGVVGGVGGVGVSVGQPGI-------- 61
            ||.:||  :||     :|.:|:.|.                        :...:|.:
  Rat    53 CSEIDT--VGT-----APSSPISVT------------------------LEPPEPHLVTDGPQHH 86

  Fly    62 -----GQQGVPPVPSVLMVNKMTPNCDKR-------------SADTAYWMTASEGGFI------N 102
                 |||  ||.||......:.|:..::             ||..|  ...|...|:      :
  Rat    87 HHLHHGQQ--PPPPSAPPAQSLQPSPQQQPPPQPQSAAQQLGSAAAA--PRTSTSSFLIKDILGD 147

  Fly   103 SQPSMAEFLNHLSPESPKIGTPVGSGAIGGVGVNVNVNVGVGVGYPVGVVPQTP----------- 156
            |:|..|     .:|.|..:.:|                            ..||
  Rat   148 SKPLAA-----CAPYSTSVSSP----------------------------HHTPKQECNAAHESF 179

  Fly   157 ----DGMDSVPEYPWMKEKKTSRKSSNNNNQGDNSIT---EFVPENG-LPRRLRTAYTNTQLLEL 213
                :..||..:....::.::..|......:||..||   |..|... .||:.|||:::.||.:|
  Rat   180 RPKLEQEDSKTKLDKREDSQSDIKCHGTKEEGDREITSSRESPPVRAKKPRKARTAFSDHQLNQL 244

  Fly   214 EKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQT 257
            |:.|...|||....|:::||:|:||:.|||.|:||||.|.||||
  Rat   245 ERSFERQKYLSVQDRMDLAAALNLTDTQVKTWYQNRRTKWKRQT 288

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	27/55 (49%)
Barhl2	NP_075245.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..134		21/115 (18%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	154..237		19/110 (17%)
		Homeodomain	230..286	CDD:459649	27/55 (49%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	364..384