DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pb and vent

DIOPT Version :10

Sequence 1:NP_476669.3 Gene:pb / 40826 FlyBaseID:FBgn0051481 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_571775.1 Gene:vent / 64810 ZFINID:ZDB-GENE-010108-2 Length:170 Species:Danio rerio


Alignment Length:63 Identity:33/63 - (52%)
Similarity:42/63 - (66%) Gaps:0/63 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   194 ENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQ 256
            |.|..||:||.:|..|:..|||.|..::||...:|.:||..|.|:|.|||.||||||||.||:
Zfish    60 EAGQNRRVRTKFTCDQISGLEKSFSKHRYLGATQRRKIAEKLHLSETQVKTWFQNRRMKLKRE 122

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pbNP_476669.3 Homeodomain 199..255 CDD:459649 29/55 (53%)
ventNP_571775.1 Homeodomain 65..121 CDD:459649 29/55 (53%)

Return to query results.
Submit another query.