Protein Alignment pb and hoxa1a

DIOPT Version :10

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: NP_571611.1
• Gene: hoxa1a / 58051
• ZFINID: ZDB-GENE-000823-5
• Length: 329
• Species: Danio rerio
• Alignment Length: 356
• Identity: 99/356 - (27%)
• Similarity: 132/356 - (37%)
• Gaps: 114/356 - (32%)

  Fly    33 TSLPVGGCGGAGVVGGVGGVGVSVGQPGIGQQGVPPVPSVLMVNKMTPNCDKRSADTAYWMTASE 97
            :|:..||.||:|     |...|....   |..|:....|...|.  ..:|   |.|..:....|.
Zfish     8 SSISGGGDGGSG-----GSCSVRAFH---GDHGLSTFQSSCAVR--LNSC---SGDERFMSNISS 59

  Fly    98 GGFINSQPSMAEFLNHLSPES--------PKIGT--------------------------PV--- 125
            ...|||||..|.  ::.||.:        |..||                          |:
Zfish    60 QDVINSQPQQAG--SYQSPGTLSITYSAHPSYGTQSFCTGYNHYALNQDVESSVSFPQCGPLVYS 122

  Fly   126 ------------------------------GSGAIGGVGVNVNVNVGVGVGYPVGV--VPQ---- 154
                                          ||...|......|:....|...|:..  ||.
Zfish   123 GNISSTVVQHRHHRHGYSSGNVHLHGQFQYGSATYGNSSDQANLTFVAGCSNPLSPLHVPHHDAC 187

  Fly   155 -TP--DGMDSVPEYPWMKEKKTSRKSSNNNNQGDNSITEFVPENGLPRRLRTAYTNTQLLELEKE 216
             :|  ||:.:...:.|||.|:...|:......|         ..|.|..:||.::..||.|||||
Zfish   188 CSPLSDGVPTGQTFDWMKVKRNPPKTGKAGEYG---------FGGQPNTVRTNFSTKQLTELEKE 243

  Fly   217 FHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQ----TLSKTDDEDNKDSLKGDDDQS 277
            |||||||.|.||:||||||.|.|.|||:||||||||.|::    .|.|:..| .||.|:..:|.|
Zfish   244 FHFNKYLTRARRVEIAASLQLNETQVKIWFQNRRMKQKKREKEGLLPKSLSE-QKDGLEKTEDAS 307

  Fly   278 DSNSNSKKSCQGCELPSDDIPDSTSNSRGHN 308
            :.:.::         ||...|..|..:...|
Zfish   308 EKSPSA---------PSTPSPSPTVEAYSSN 329

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	38/55 (69%)
hoxa1a	NP_571611.1	Antp-type hexapeptide	200..205		1/4 (25%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	208..227		4/27 (15%)
		Homeodomain	229..282	CDD:459649	38/52 (73%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	277..329		16/61 (26%)