Protein Alignment pb and msx2a

DIOPT Version :10

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: NP_001025440.1
• Gene: msx2a / 573620
• ZFINID: ZDB-GENE-980526-322
• Length: 257
• Species: Danio rerio
• Alignment Length: 143
• Identity: 47/143 - (32%)
• Similarity: 63/143 - (44%)
• Gaps: 43/143 - (30%)

  Fly   152 VPQTPDGMDSVPEYPWMKEKKTSRKSSNNN---NQGDNSI----TEFV----------------- 192
            :|.:.|.:.|..|    :.:.|||.|.:..   ||.|.||    .:|.
Zfish    41 LPFSVDALMSTKE----RSESTSRGSIHMTRIINQDDRSIYSDSVDFTKRCESAKEDSSWINKPR 101

  Fly   193 ----PENGLP-----------RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQV 242
                |.:..|           |:.||.:|..|||.||::|...:||....|.|.::||.|||.||
Zfish   102 LSTSPRSQSPTICPLRKHKTNRKPRTPFTTAQLLALERKFRQKQYLSIAERAEFSSSLSLTETQV 166

  Fly   243 KVWFQNRRMKHKR 255
            |:||||||.|.||
Zfish   167 KIWFQNRRAKAKR 179

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	29/55 (53%)
msx2a	NP_001025440.1	Homeodomain	123..179	CDD:459649	29/55 (53%)