Protein Alignment pb and hoxa13a

DIOPT Version :10

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: NP_001078963.1
• Gene: hoxa13a / 570239
• ZFINID: ZDB-GENE-990415-5
• Length: 310
• Species: Danio rerio
• Alignment Length: 281
• Identity: 73/281 - (25%)
• Similarity: 102/281 - (36%)
• Gaps: 74/281 - (26%)

  Fly     6 SSLDTTSMGTQIKSESPLNPLQVQTGQTSLPVGGCGGAGVV--------GGVGGVGVSVGQPGIG 62
            |.:...:.|...|..||.:.:| .:...|:..|..||.|..        |..|||......|..|
Zfish    64 SEVAAAAAGDSGKQCSPCSAVQ-GSASASISYGYFGGGGYYPCRMSHHHGSGGGVKTCAQSPASG 127

  Fly    63 QQGVPPVPSVLMVNKMTPNCDK---RSADTAYWMTASEGGFINSQPSMAEFLNHLSPESP---KI 121
                            :|..:|   .||.|....|:|.........|.|.     ||..|   .:
Zfish   128 ----------------SPYGEKYMDTSASTGEDYTSSRAKEFALYSSYAS-----SPYQPVPSYL 171

  Fly   122 GTPVGSGAIGGVGVNVNVNVGVGVGYPVGVVPQTPDGMDSVP--EYP--------WMKEKKTSRK 176
            ..||.. ||.|                    |..|.....:|  .|.        |..:...:::
Zfish   172 DVPVVQ-AISG--------------------PSEPRHESLLPMESYQPWAITTSGWNGQVYCTKE 215

  Fly   177 SSNNNNQGDNSITEFVPENGLP-------RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAAS 234
            .....|...:||.|.|...|..       |:.|..||..||.|||:|:..||::.:.:|..|:|.
Zfish   216 QQQTGNVWKSSIPESVSHGGADGSSFRRGRKKRVPYTKVQLKELEREYATNKFITKDKRRRISAQ 280

  Fly   235 LDLTERQVKVWFQNRRMKHKR 255
            .:|:||||.:||||||:|.|:
Zfish   281 TNLSERQVTIWFQNRRVKEKK 301

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	27/55 (49%)
hoxa13a	NP_001078963.1	HoxA13_N	29..148	CDD:463521	23/100 (23%)
		Homeodomain	245..301	CDD:459649	27/55 (49%)