DRSC/TRiP Functional Genomics Resources

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Protein Alignment pb and LOC5667880

DIOPT Version :10

Sequence 1:NP_476669.3 Gene:pb / 40826 FlyBaseID:FBgn0051481 Length:782 Species:Drosophila melanogaster
Sequence 2:XP_061516985.1 Gene:LOC5667880 / 5667880 VectorBaseID:AGAMI1_002933 Length:507 Species:Anopheles gambiae


Alignment Length:342 Identity:77/342 - (22%)
Similarity:113/342 - (33%) Gaps:115/342 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SLDTTSMGTQIKSESPLNPLQVQTGQTS--LPVGGCGGAGVVG-GV------------------G 50
            |||.|:..:....:|...|....:.||:  ||:........:| |:                  |
Mosquito   131 SLDVTAPTSYPDDQSAALPYGTMSSQTASCLPLQPVLNPSAIGTGIPYDPPPYYSYSHHAHHLFG 195

  Fly    51 GVGVSVGQPGIGQQGVPP-------------VPSVLMVNKMTP------------NCDKRSADTA 90
            |...::|..|:..:  ||             ||||  :...||            :.|..|....
Mosquito   196 GGSAALGSSGVVSE--PPRSSYTYGGVNLDYVPSV--IQHSTPSETAANSSNQQLSPDSTSPGPE 256

  Fly    91 YWMTASEGGFINSQPSMAEFLNHLSPESPKIGTPVGSGAIGGVGVNVNVNVGVGVGYPVGVVPQT 155
            .:..||...........::.|..|..:.|.:....      .|..|.|.|       .......|
Mosquito   257 LYSLASYSNIPRVVNEASDRLVALESDGPSLDPEC------SVDTNNNNN-------NHHTPDDT 308

  Fly   156 PDGMDSVPEYPWMKEKKTSRKSSNNNNQGDNSITEFVPENGL-------PRRLRTAYTNTQLLEL 213
            ||.:||          ...|.|.:..::|         |:|.       .|:.|..::.:|..||
Mosquito   309 PDDLDS----------PGPRASRSGGHRG---------ESGCGTGGGHKKRKRRILFSKSQTFEL 354

  Fly   214 EKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKR-QTLSKTDDEDNKDSLKGDDDQS 277
            |:.|...:||..|.|..:|:.::||..|||:||||.|.|.|| ||                    
Mosquito   355 ERRFKQARYLSAPEREHLASMINLTPTQVKIWFQNHRYKTKRAQT-------------------- 399

  Fly   278 DSNSNSKKSCQGCELPS 294
                 .|.||.|...|:
Mosquito   400 -----EKSSCYGAPPPN 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pbNP_476669.3 Homeodomain 199..255 CDD:459649 23/55 (42%)
LOC5667880XP_061516985.1 None

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