DRSC/TRiP Functional Genomics Resources

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Protein Alignment pb and LOC5667286

DIOPT Version :10

Sequence 1:NP_476669.3 Gene:pb / 40826 FlyBaseID:FBgn0051481 Length:782 Species:Drosophila melanogaster
Sequence 2:XP_061500308.1 Gene:LOC5667286 / 5667286 VectorBaseID:AGAMI1_005662 Length:482 Species:Anopheles gambiae


Alignment Length:294 Identity:92/294 - (31%)
Similarity:135/294 - (45%) Gaps:66/294 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   188 ITEFVPEN---GLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNR 249
            |||...:|   |..||.|||:|:.|||||||:|..:|||.||:|.|:|.:|.|:|.|||:|||||
Mosquito   216 ITELTGQNSVYGKARRPRTAFTSQQLLELEKQFKVSKYLSRPKRYEVANNLLLSETQVKIWFQNR 280

  Fly   250 RMKHKRQTLSKTDDEDNKDSLKGDDDQSDSNSNSKKSCQGCELPSDDIPDSTSNSRGHNNNTPSA 314
            |||.||   |:..:|..|.|         :|||                    ||..:||||.:.
Mosquito   281 RMKWKR---SRKVNESKKYS---------NNSN--------------------NSGSNNNNTTTT 313

  Fly   315 TNNNPSAGNLTPNSSL---ETGISSNLMGSTT--VSASNVISADSSVASSVSLDEDIEESSPIKV 374
            ||::.|:.:...|||.   .||.:||:...:.  :.:|||.||.:...:..||.......:....
Mosquito   314 TNSSSSSSSSNSNSSTNGSSTGSNSNISNHSNGPLGSSNVNSAHNGGGTGGSLLHGSGNKTSTDH 378

  Fly   375 KKKDDGQVIKKEAVSTSSKASPFGYENSTPSLVS----------FRRDSDASAVGNAPTSKAVG- 428
            :..|.|:...:.|      ..|...::.|..:||          .:|||:.:...:|..:.|.. 
Mosquito   379 QGADGGRPFNRSA------GDPGRTDHCTSGMVSKLSCILDHPKDKRDSNGTGKQHATAATAAAA 437

  Fly   429 ---KKRFQSAANAIATPTPLSDSNSGNGSGGGPA 459
               .::||.....:...:|      .:..|.|||
Mosquito   438 LFVNQQFQQTVGGVGAGSP------NDIVGVGPA 465

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pbNP_476669.3 Homeodomain 199..255 CDD:459649 36/55 (65%)
LOC5667286XP_061500308.1 None

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