DRSC/TRiP Functional Genomics Resources

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Protein Alignment pb and BARX1

DIOPT Version :10

Sequence 1:NP_476669.3 Gene:pb / 40826 FlyBaseID:FBgn0051481 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_067545.3 Gene:BARX1 / 56033 HGNCID:955 Length:254 Species:Homo sapiens


Alignment Length:271 Identity:70/271 - (25%)
Similarity:109/271 - (40%) Gaps:61/271 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 GQPGIGQQGVPP---------VPSVLMVNKMT-PNCDKRSADTAYWMTASEGGFINSQPSMA--E 109
            |:||..:.|.|.         ..|.::...:| |...|.:|..|....|.|......|..:|  .
Human     5 GEPGAARFGPPEGCADHRPHRYRSFMIEEILTEPPGPKGAAPAAAAAAAGELLKFGVQALLAARP 69

  Fly   110 FLNHLS------------PESPKIGTPVGSGAIGGVGVNVNVNVGVGVGYPVGVVPQTPDGMDSV 162
            |.:||:            |.:|          :|..|:: :..:..|.|.|         |....
Human    70 FHSHLAVLKAEQAAVFKFPLAP----------LGCSGLS-SALLAAGPGLP---------GAAGA 114

  Fly   163 PEYPWMKEKKTSRKSSNNNNQGDNSITEFVPENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPR 227
            |..|...:.:...:::.....|..:      :.|  ||.||.:|..||:.|||.|...|||..|.
Human   115 PHLPLELQLRGKLEAAGPGEPGTKA------KKG--RRSRTVFTELQLMGLEKRFEKQKYLSTPD 171

  Fly   228 RIEIAASLDLTERQVKVWFQNRRMKHKRQTL--------SKTDDEDNKDSLKGDDDQSDSNSNSK 284
            ||::|.||.|::.|||.|:||||||.|:..|        :|......|:|:. ..:|......:|
Human   172 RIDLAESLGLSQLQVKTWYQNRRMKWKKIVLQGGGLESPTKPKGRPKKNSIP-TSEQLTEQERAK 235

  Fly   285 KSCQGCELPSD 295
            .:.:..|:|.:
Human   236 DAEKPAEVPGE 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pbNP_476669.3 Homeodomain 199..255 CDD:459649 31/55 (56%)
BARX1NP_067545.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..20 5/14 (36%)
Homeodomain 143..199 CDD:459649 31/55 (56%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 204..254 7/44 (16%)

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