Protein Alignment pb and nkx6.3

DIOPT Version :10

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: NP_001159612.1
• Gene: nkx6.3 / 558978
• ZFINID: ZDB-GENE-070810-7
• Length: 272
• Species: Danio rerio
• Alignment Length: 262
• Identity: 73/262 - (27%)
• Similarity: 98/262 - (37%)
• Gaps: 86/262 - (32%)

  Fly   101 INSQ------PSMAEFLNHLSPESPKIGTPV---GSGAIGGVGVNVNVNVGVGVGYPVGVVPQTP 156
            ||||      ..:::.|:......|  |||.   |..::||.|..|   ...||.|.   ...||
Zfish    43 INSQLQAGTPHGISDILSRSMVSGP--GTPALLSGYPSMGGFGTTV---PSPGVYYN---RDYTP 99

  Fly   157 DGMDSVP----EYPWMKEKKTS-----------RKSSNNNNQGDNSITEFVPEN-GLPRRLRTAY 205
            .|:.:.|    |...||.|.:|           .:....||.|.|      ||| |..:..|..:
Zfish   100 SGLSTFPKPVVECAGMKGKSSSCWVDGGYEWRGARQQCGNNMGHN------PENVGKKKHTRPTF 158

  Fly   206 TNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLSKTDDEDNKDSL 270
            :..|:..|||.|...|||..|.|..:|.||.:||.||||||||||.|.::::.::
Zfish   159 SGHQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRKKSATE---------- 213

  Fly   271 KGDDDQSDSNSNSKKSCQGCELPSDDIPDSTSNSRGHN------NNTPSATNNNPSAGNLTPNSS 329
                                       |.||..|||.:      |.......|.|    |.|::.
Zfish   214 ---------------------------PSSTQTSRGESAGDGSENEVEDEEYNKP----LDPDTD 247

  Fly   330 LE 331
            .|
Zfish   248 DE 249

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	27/55 (49%)
nkx6.3	NP_001159612.1	Homeodomain	150..208	CDD:459649	27/57 (47%)