Protein Alignment pb and Noto

DIOPT Version :10

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: NP_001178943.1
• Gene: Noto / 502857
• RGDID: 1562910
• Length: 245
• Species: Rattus norvegicus
• Alignment Length: 138
• Identity: 41/138 - (29%)
• Similarity: 57/138 - (41%)
• Gaps: 47/138 - (34%)

  Fly   199 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLSKTDD 263
            :|:||.::..||.||||.|.....|....|.::||.|.|||.||::||||||:|:::|
  Rat   155 KRVRTMFSEQQLGELEKVFAKQHNLVGKERAQLAARLHLTENQVRIWFQNRRVKYQKQ------- 212

  Fly   264 EDNKDSLKGDDDQSDSNSNSKKSCQGCELPSDDIPDSTSNSRGHNNNTPSATNNNPSAGNLTPNS 328
                                    |..:.|..|..:..|||               |.||:. |.
  Rat   213 ------------------------QKLKSPPPDAMEEPSNS---------------SEGNVR-NE 237

  Fly   329 SLETGISS 336
            ..|.|:.|
  Rat   238 DAEAGVGS 245

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	27/55 (49%)
Noto	NP_001178943.1	Homeodomain	155..211	CDD:459649	27/55 (49%)