Protein Alignment pb and Hoxa7

DIOPT Version :10

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: NP_001102703.2
• Gene: Hoxa7 / 500126
• RGDID: 1587253
• Length: 229
• Species: Rattus norvegicus
• Alignment Length: 237
• Identity: 77/237 - (32%)
• Similarity: 98/237 - (41%)
• Gaps: 75/237 - (31%)

  Fly    94 TASEGGFINSQPSMAEFLNHLSPESPKIGTPVGSGAIGGVGVNV----NVN-----------VGV 143
            ||....|.|::|:...|    :|.|.:.|...|:||...   ||    |||           .|:
  Rat    15 TAGASLFQNAEPTSCSF----APNSQRSGYGPGAGAFAS---NVPGLYNVNSPLYQNPFASSYGL 72

  Fly   144 GV---GYPVGVVPQTPDGM---------DSVPE-------------YPWMKEKKTSRKSSNNNNQ 183
            |.   ..|.....|...|:         |...|             ||||:.....||
  Rat    73 GADAYNLPCASYDQNIPGLCSDLAKGACDKADEGVLHGPAEASFRIYPWMRSSGPDRK------- 130

  Fly   184 GDNSITEFVPENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQN 248
                            |.|..||..|.||||||||||:||.|.||||||.:|.|||||:|:||||
  Rat   131 ----------------RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQN 179

  Fly   249 RRMK----HKRQTLSKTD-DEDNKDSLKGDDDQSDSNSNSKK 285
            ||||    ||.::.:.|. .||...|:....|::|.....::
  Rat   180 RRMKWKKEHKDESQAPTAVPEDAVPSVSTAADKADEEEEEEE 221

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	40/59 (68%)
Hoxa7	NP_001102703.2	Homeodomain	130..186	CDD:459649	40/78 (51%)