Protein Alignment pb and Hoxb4

DIOPT Version :10

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: NP_001094257.1
• Gene: Hoxb4 / 497988
• RGDID: 1560113
• Length: 250
• Species: Rattus norvegicus
• Alignment Length: 157
• Identity: 59/157 - (37%)
• Similarity: 76/157 - (48%)
• Gaps: 48/157 - (30%)

  Fly   165 YPWMKEKKTSRKSSNNNNQGDNSITEFVPENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRI 229
            ||||::...|  :.|.|..|           |.|:|.|||||..|:||||||||:|:||.|.||:
  Rat   141 YPWMRKVHVS--TVNPNYAG-----------GEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRV 192

  Fly   230 EIAASLDLTERQVKVWFQNRRMKHKRQTLSKTDDEDNKDSLKGDDDQSDSNSNSKKSCQGCELPS 294
            |||.:|.|:|||:|:||||||||.|:         |:|                        ||:
  Rat   193 EIAHALCLSERQIKIWFQNRRMKWKK---------DHK------------------------LPN 224

  Fly   295 DDIPDSTSNSRGHNNNTPSATNNNPSA 321
            ..|  .:..:.|.....|...|..|.|
  Rat   225 TKI--RSGGTAGAAGGPPGRPNGGPPA 249

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	38/55 (69%)
Hoxb4	NP_001094257.1	Homeodomain	162..218	CDD:459649	38/55 (69%)