Protein Alignment pb and hoxa5

DIOPT Version :10

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: NP_001011405.1
• Gene: hoxa5 / 496880
• XenbaseID: XB-GENE-486061
• Length: 274
• Species: Xenopus tropicalis
• Alignment Length: 264
• Identity: 81/264 - (30%)
• Similarity: 106/264 - (40%)
• Gaps: 96/264 - (36%)

  Fly    48 GVGGVGVSVGQPGIGQ-------QGVPPVPSVLMVNKMTPNCDKRSADTAYWMTASEGGFINSQP 105
            |..|:.:|||:.....       :..|..||             .|.:..|           :||
 Frog    48 GYNGMDLSVGRSASNHFSANDRARNYPSNPS-------------SSTEPRY-----------NQP 88

  Fly   106 SMAEFLNHLSPESP----KIGT-PVGSGAIGG------------------VGVNVNVNVGVGVGY 147
            :.:.   |..|..|    .:.| ||.....||                  .|.:.::|.. |:|.
 Frog    89 AASA---HSPPPDPLPCTAVATSPVSDSHQGGKNSITNSNNTTSNSSNSSTGTSTHINRD-GLGA 149

  Fly   148 PVGVVPQTPDGMDSV-------------PE-YPWMKEKKTSRKSSNNNNQGDNSITEFVPENGLP 198
            ..|.....|...|..             |: ||||::...|     ::|.|.       ||.
 Frog   150 SSGAEDDAPASSDQASSQNSQSPAPSVQPQIYPWMRKLHIS-----HDNIGG-------PEG--- 199

  Fly   199 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLSKTDD 263
            :|.|||||..|.||||||||||:||.|.||||||.:|.|:|||:|:||||||||.|:
 Frog   200 KRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKK-------- 256

  Fly   264 EDNK 267
             |||
 Frog   257 -DNK 259

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	40/55 (73%)
hoxa5	NP_001011405.1	Homeodomain	200..256	CDD:459649	40/55 (73%)