DRSC/TRiP Functional Genomics Resources

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Protein Alignment pb and NKX3-1

DIOPT Version :10

Sequence 1:NP_476669.3 Gene:pb / 40826 FlyBaseID:FBgn0051481 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_006158.2 Gene:NKX3-1 / 4824 HGNCID:7838 Length:234 Species:Homo sapiens


Alignment Length:242 Identity:64/242 - (26%)
Similarity:99/242 - (40%) Gaps:51/242 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 VGQPGIGQQ----GVPPVPSVLMVNKMTPNCDKRSADTAYWMTASEGGFINSQPSMAEFLNHLSP 116
            |.:|..|:.    ..||.||..:.:.:..:..:..|.       .:||..:||       ....|
Human     4 VPEPRPGEAKAEGAAPPTPSKPLTSFLIQDILRDGAQ-------RQGGRTSSQ-------RQRDP 54

  Fly   117 ESPKIGTPVGSGAIGGVGVNVNVNVGVGVGYPVGVVPQTPDGMDSVPEYPWMKEKKTSRKSSNNN 181
            |......|.|..:..|...:                 |...|..:.||     |.:|..::....
Human    55 EPEPEPEPEGGRSRAGAQND-----------------QLSTGPRAAPE-----EAETLAETEPER 97

  Fly   182 NQGDNSITEFVPENGLPR----------RLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLD 236
            :.|...:........|||          |.|.|:::||::|||::|...|||..|.|..:|.:|.
Human    98 HLGSYLLDSENTSGALPRLPQTPKQPQKRSRAAFSHTQVIELERKFSHQKYLSAPERAHLAKNLK 162

  Fly   237 LTERQVKVWFQNRRMKHKRQTL-SKTDDEDNKDSLKGDDDQSDSNSN 282
            |||.|||:||||||.|.||:.| |:..|.:...||....:::.|.::
Human   163 LTETQVKIWFQNRRYKTKRKQLSSELGDLEKHSSLPALKEEAFSRAS 209

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pbNP_476669.3 Homeodomain 199..255 CDD:459649 30/65 (46%)
NKX3-1NP_006158.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..131 29/162 (18%)
Homeodomain 125..181 CDD:459649 29/55 (53%)

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