Protein Alignment pb and hoxc8a

DIOPT Version :9

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: NP_001005771.1
• Gene: hoxc8a / 449648
• ZFINID: ZDB-GENE-990415-114
• Length: 250
• Species: Danio rerio
• Alignment Length: 243
• Identity: 71/243 - (29%)
• Similarity: 105/243 - (43%)
• Gaps: 58/243 - (23%)

  Fly    80 PNCDKRSADTAYWMTASEGGFINSQPSMAEFLNHLSPESPKIGTPVGSGAIGGVGVNVNVNVGVG 144
            |....||....|...|:..||.:....:.:|.:|            |:..|...|...|......
Zfish    29 PQSVARSHTLVYGHGAAAPGFQHPSHHVQDFFHH------------GTTGISNPGYQQNPCALAC 81

  Fly   145 VG-----YPVGVVPQTP----DGMDSVPEYPWMKEKKTSRKSSNNNNQGDNSITEFVPENGLP-- 198
            .|     |....:|:.|    ....::.:||       ..||||:.|.|:..  ..:.:|..|
Zfish    82 HGDATKFYGYEALPRQPLYGTQQEATLAQYP-------DCKSSNSTNPGEGQ--GHLSQNSSPSL 137

  Fly   199 ------------RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRM 251
                        |..|..|:..|.|||||||.||.||.|.||||::.:|.|||||||:|||||||
Zfish   138 MFPWMRPHAPGRRNGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALSLTERQVKIWFQNRRM 202

  Fly   252 KHKR------------QTLSKTDDEDNKD--SLKGDDDQSDSNSNSKK 285
            |.|:            :..::.::|.|:|  :.:|:|.:::....||:
Zfish   203 KWKKENNKDKFPGQRGEAEAEAEEEGNEDGEAEEGEDKETEEKEESKE 250

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	COG5576	168..274	CDD:227863	49/133 (37%)
		Homeobox	202..254	CDD:278475	35/51 (69%)
hoxc8a	NP_001005771.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	112..152		10/48 (21%)
		Antp-type hexapeptide. /evidence=ECO:0000255	138..143		0/4 (0%)
		Homeobox	153..205	CDD:278475	35/51 (69%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	206..250		6/43 (14%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	3	2.810