Protein Alignment pb and dmbx2

DIOPT Version :10

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: NP_001003563.1
• Gene: dmbx2 / 445169
• ZFINID: ZDB-GENE-040801-82
• Length: 266
• Species: Danio rerio
• Alignment Length: 249
• Identity: 57/249 - (22%)
• Similarity: 93/249 - (37%)
• Gaps: 73/249 - (29%)

  Fly   199 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKR----QTLS 259
            ||.|||::.:||..|||.|...:|.....|..:|..::|.|.:::|||:|||.|.::    ..|.
Zfish    72 RRSRTAFSVSQLQALEKAFQQTQYPDVGMRERLAVCINLPEARIQVWFKNRRAKFRKGQRFAPLP 136

  Fly   260 KTDDEDNKDSLKGDDDQSDSNSNSKKSCQGCELPSDDIPDSTSNSRGHNNNTPSATNNNPSAGNL 324
            |.:.:.::.:.|                |..||..|.  :.|.||:..:    |...|||
Zfish   137 KEESQVHRSATK----------------QRKELVKDQ--EKTYNSKPQS----SIRENNP----- 174

  Fly   325 TPNSSLETGISSNLMGSTTVSASNV-ISADSSVASSVSLD----EDIEESSPIKVKKKDDGQVIK 384
                             .::||.:| :.:...:.||..|.    |..::..|
Zfish   175 -----------------ISLSADSVQLHSHPRLHSSAVLPFITAEHFQQPMP------------- 209

  Fly   385 KEAVSTSSKASPFGYENSTPSLVSFRRDSDASAVGNAPTSKAVGKKRFQSAANA 438
             .|:...|...||     :|:.|........:.:|..|..|: .....|||..:
Zfish   210 -HALGLLSAGLPF-----SPTYVPIIHQQHNTGIGLVPLGKS-SNLMLQSACQS 256

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	23/55 (42%)
dmbx2	NP_001003563.1	Homeodomain	72..128	CDD:459649	23/55 (42%)