DRSC/TRiP Functional Genomics Resources

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Protein Alignment pb and C15

DIOPT Version :10

Sequence 1:NP_476669.3 Gene:pb / 40826 FlyBaseID:FBgn0051481 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_476873.2 Gene:C15 / 42544 FlyBaseID:FBgn0004863 Length:339 Species:Drosophila melanogaster


Alignment Length:74 Identity:33/74 - (44%)
Similarity:45/74 - (60%) Gaps:3/74 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly   194 ENGLP---RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKR 255
            :|..|   ::.||::|..|:.||||.||..|||....|..:|..|.:|:.|||.||||||.|.:|
  Fly   210 QNRTPPKRKKPRTSFTRIQVAELEKRFHKQKYLASAERAALARGLKMTDAQVKTWFQNRRTKWRR 274

  Fly   256 QTLSKTDDE 264
            ||..:.:.|
  Fly   275 QTAEEREAE 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pbNP_476669.3 Homeodomain 199..255 CDD:459649 27/55 (49%)
C15NP_476873.2 COG5576 <196..315 CDD:227863 33/74 (45%)
Homeodomain 218..274 CDD:459649 27/55 (49%)

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