Protein Alignment pb and Ubx

DIOPT Version :9

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Alignment Length: 279
• Identity: 90/279 - (32%)
• Similarity: 121/279 - (43%)
• Gaps: 77/279 - (27%)

  Fly    38 GGCGGAGVVGGVGGVGVSVGQPGI---GQQ----GVPPVPSVLMVNKMTPNCDKRSADTAYWMTA 95
            ||.||.|..||.||.|.:.|....   ||.    |:|..||.     .||  |.|
  Fly   116 GGGGGGGGAGGTGGAGNANGGNAANANGQNNPAGGMPVRPSA-----CTP--DSR---------- 163

  Fly    96 SEGGFINSQPSMAEFLNHLSPESPK-------IGTPVGSGAIGGVGVNVNVNVGVGVGYPV---- 149
             .||::::...        ||.|.:       :....|:|..|||...|.| .|.|..:..
  Fly   164 -VGGYLDTSGG--------SPVSHRGGSAGGNVSVSGGNGNAGGVQSGVGV-AGAGTAWNANCTI 218

  Fly   150 -GVVPQTPDGMDSVPE------YPWM------KEKKTSRKSSNNNNQ----------------GD 185
             |...||. ...|:.:      ||||      .|..|..|..::..|                ..
  Fly   219 SGAAAQTA-AASSLHQASNHTFYPWMAIAGECPEDPTKSKIRSDLTQYGGISTDMGKRYSESLAG 282

  Fly   186 NSITEFVPENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRR 250
            :.:.:::..|||.||.|..||..|.||||||||.|.||.|.||||:|.:|.|||||:|:||||||
  Fly   283 SLLPDWLGTNGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRR 347

  Fly   251 MKHKR--QTLSKTDDEDNK 267
            ||.|:  |.:.:.::::.:
  Fly   348 MKLKKEIQAIKELNEQEKQ 366

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	COG5576	168..274	CDD:227863	48/124 (39%)
		Homeobox	202..254	CDD:278475	36/51 (71%)
Ubx	NP_536752.1	Homeobox	299..352	CDD:395001	36/52 (69%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	53	1.000	Domainoid score	I4196
eggNOG	1	0.900	-	-		E2759_KOG0489
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000007
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	4	3.810