Protein Alignment pb and Antp

DIOPT Version :10

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: NP_996167.1
• Gene: Antp / 40835
• FlyBaseID: FBgn0260642
• Length: 378
• Species: Drosophila melanogaster
• Alignment Length: 300
• Identity: 94/300 - (31%)
• Similarity: 125/300 - (41%)
• Gaps: 104/300 - (34%)

  Fly    16 QIKSESPLNPLQV----QTGQTSLPVGGCGGAGVVGGVGGVGVSVGQPGIGQQGVPPVPSVLMVN 76
            |::.:.|....||    |..|..:....|.....|||:|.|         .:.|.||     :|:
  Fly   134 QLQQQLPQVTQQVTHPQQQQQQPVVYASCKLQAAVGGLGMV---------PEGGSPP-----LVD 184

  Fly    77 KMTPNCDKRSADTAYWMTASEGGFINSQPSMAEFLNHLSPESPKIGTPVGSGAIGGVGVNVNVNV 141
            :|:                  |..:|:|.::...:.|  |::....|.||...:..|..| :.|:
  Fly   185 QMS------------------GHHMNAQMTLPHHMGH--PQAQLGYTDVGVPDVTEVHQN-HHNM 228

  Fly   142 GV-----GVGYPVGVVPQ--------------------TP---------DGMDSVPEYPWMKE-- 170
            |:     ||. |||..||                    ||         .||.| |.||||:.
  Fly   229 GMYQQQSGVP-PVGAPPQGMMHQGQGPPQMHQGHPGQHTPPSQNPNSQSSGMPS-PLYPWMRSQF 291

  Fly   171 -KKTSRKSSNNNNQGDNSITEFVPENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAAS 234
             |...||                       |.|..||..|.||||||||||:||.|.||||||.:
  Fly   292 GKCQERK-----------------------RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 333

  Fly   235 LDLTERQVKVWFQNRRMKHKRQTLSKTDDEDNKDSLKGDD 274
            |.|||||:|:||||||||.|::  :||..|..... :||:
  Fly   334 LCLTERQIKIWFQNRRMKWKKE--NKTKGEPGSGG-EGDE 370

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	39/55 (71%)
Antp	NP_996167.1	KLF1_2_4_N	<161..306	CDD:425360	46/204 (23%)
		Homeodomain	298..354	CDD:459649	40/78 (51%)