Protein Alignment pb and zen

DIOPT Version :10

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: NP_476793.1
• Gene: zen / 40828
• FlyBaseID: FBgn0004053
• Length: 353
• Species: Drosophila melanogaster
• Alignment Length: 353
• Identity: 94/353 - (26%)
• Similarity: 142/353 - (40%)
• Gaps: 102/353 - (28%)

  Fly   148 PVGVVPQTPDGMDSVPEYPWMKEKKTSRK---SSNNNNQGDNSITEFVPENGLP---------RR 200
            |:|:          .|.|..|....|:..   |..:.:|...|..|.:|..  |         :|
  Fly    40 PIGL----------PPNYNQMNSNPTTLNDHCSPQHVHQQHVSSDENLPSQ--PNHDSQRVKLKR 92

  Fly   201 LRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLSKTDDED 265
            .|||:|:.||:|||.||..|.||.|.||||||..|.|.|||||:||||||||.|:......:.:.
  Fly    93 SRTAFTSVQLVELENEFKSNMYLYRTRRIEIAQRLSLCERQVKIWFQNRRMKFKKDIQGHREPKS 157

  Fly   266 N-----------------KDSLKGDDDQSDSNSNSKKSCQGCELPSDDIPDSTSNSRGHNNNTPS 313
            |                 |..:....|..:..:.::|.......|.:..||..::.:   ..|.:
  Fly   158 NAKLAQPQAEQSAHRGIVKRLMSYSQDPREGTAAAEKRPMMAVAPVNPKPDYQASQK---MKTEA 219

  Fly   314 ATNNNP-SAGNLTPNSSLETGISSNLMGSTTVSASNVISADSSVASSVSLDEDIEESSPIKVKKK 377
            :|||.. |:.:|:.       |..:|  :.|.:|..|.:|.||..:|.:
  Fly   220 STNNGMCSSADLSE-------ILEHL--AQTTAAPQVSTATSSTGTSTN---------------- 259

  Fly   378 DDGQVIKKEAVSTSSKASPFGYENSTPSLVSFRRDSDASAVGNAPTSKAVGKKRFQSAANAIAT- 441
                      .::||.:..:.| |....|.|.::|.:|:|       :|..|.:   :|..:||
  Fly   260 ----------SASSSSSGHYSY-NVDLVLQSIKQDLEAAA-------QAWSKSK---SAPILATQ 303

  Fly   442 ----------PTPLSDSNSGNGSGGGPA 459
                      ||.:..:.|.|.|.|.||
  Fly   304 SWHPSSQSQVPTSVHAAPSMNLSWGEPA 331

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	37/55 (67%)
zen	NP_476793.1	Homeodomain	91..147	CDD:459649	37/55 (67%)