DRSC/TRiP Functional Genomics Resources

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Protein Alignment pb and mnx2a

DIOPT Version :9

Sequence 1:NP_476669.3 Gene:pb / 40826 FlyBaseID:FBgn0051481 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_001009886.2 Gene:mnx2a / 406205 ZFINID:ZDB-GENE-040415-1 Length:309 Species:Danio rerio


Alignment Length:336 Identity:88/336 - (26%)
Similarity:137/336 - (40%) Gaps:89/336 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 PGIGQQGVPPVPSVLMVNKMTPNCDKRSADTAYWMTAS---EGGFIN-SQPSMAEFLNHLSPESP 119
            ||:..:||.     :.:.|.|.|    |...|:.:...   :.|.:| |.|.:            
Zfish    26 PGLCSEGVD-----VDMCKRTEN----SLPRAFQLQTGVIPKPGMLNISHPGL------------ 69

  Fly   120 KIGTPVGSGAIGGVGVNVNVNV-GVGVGYP----VGVVPQTPDGM------DSVPEYPWMKEKKT 173
               |.:..|::.|:..:...:: .:|..:|    .|.....||.:      .|:|...|::....
Zfish    70 ---TSLSQGSMPGMYPSPMYSITALGAQHPSFAYSGFTQPYPDHLKAAAMAGSLPLEHWLRAGLI 131

  Fly   174 SRKSSNNNNQGDNSITEFVPENGL---PRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASL 235
            ..:.::.:.         .|::||   .||.|||:|:.||||||.:|..||||.||:|.|:|.||
Zfish   132 MPRLADYSG---------APQSGLIGKCRRPRTAFTSQQLLELENQFKLNKYLSRPKRFEVATSL 187

  Fly   236 DLTERQVKVWFQNRRMKHKRQTLSKTDDEDNKDSLKGDDDQSDSNSNSKKSCQGCEL-------- 292
            .|||.|||:||||||||.||...:|    :....|:.|..:|....|..|....|..        
Zfish   188 MLTETQVKIWFQNRRMKWKRSRKAK----EQAAQLETDGCKSGKRGNKPKDLSRCSAHDEDEDLD 248

  Fly   293 PSDDIPDSTSNSRGHNNNTPSATNNNPSAGNLTPNSSLETGISSNLMGSTTVSASNVISADSSVA 357
            |.::..:.....|                      .|:..|:|.. ..|..:..|:.:|..|..:
Zfish   249 PEEEAEEDEEEFR----------------------RSINVGVSLP-RHSDFLQHSSALSYSSHGS 290

  Fly   358 SSVSLDEDIEE 368
            .|   |:|:||
Zfish   291 YS---DDDLEE 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pbNP_476669.3 COG5576 168..274 CDD:227863 45/108 (42%)
Homeobox 202..254 CDD:278475 36/51 (71%)
mnx2aNP_001009886.2 Homeobox 153..206 CDD:278475 36/52 (69%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.810

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