DRSC/TRiP Functional Genomics Resources

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Protein Alignment pb and pitx3

DIOPT Version :10

Sequence 1:NP_476669.3 Gene:pb / 40826 FlyBaseID:FBgn0051481 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_991238.1 Gene:pitx3 / 402974 ZFINID:ZDB-GENE-041229-4 Length:293 Species:Danio rerio


Alignment Length:271 Identity:76/271 - (28%)
Similarity:114/271 - (42%) Gaps:56/271 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   163 PEY-PWMKEKKTSRKSSNNNNQGDNSITEFVPENG----LPRRLRTAYTNTQLLELEKEFHFNKY 222
            |:: |..|.:..|....::.|..|.|    .||:|    ..||.||.:|:.||.|||..|..|:|
Zfish    24 PQHDPGCKGQDNSDTEKSHQNHTDES----NPEDGSLKKKQRRQRTHFTSQQLQELEATFQRNRY 84

  Fly   223 LCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLSKTDDEDNKDSLKGDDDQSDSNSNS-KKS 286
            .....|.|||...:|||.:|:|||:|||.|.:::       |.|:        |::...|. ...
Zfish    85 PDMSTREEIAVWTNLTEARVRVWFKNRRAKWRKR-------ERNQ--------QAELCKNGFGAQ 134

  Fly   287 CQGCELPSDDIPDSTSNSRGHNNNTPSATNNNPSAGNLTP--NSSLETGISSNLMGSTTVSASNV 349
            ..|...|.||:....|    :||....:..::|.:....|  ||...:.:||..|.|...|..::
Zfish   135 FNGLMQPYDDMYSGYS----YNNWATKSLASSPLSAKSFPFFNSMNVSPLSSQPMFSPPSSIPSM 195

  Fly   350 ISADSSVASSV---------SLDEDIEESSPIKVKKKDDGQVIKKEAVST-----SSKASPFGYE 400
            ..|.|.|.|:|         :|......:||          .:...|||.     ::.|.|:.|.
Zfish   196 NMASSMVPSAVAGVPGSGLNNLGNLNNLNSP----------TLNSAAVSAAACPYATTAGPYMYR 250

  Fly   401 NS-TPSLVSFR 410
            :: ..||.|.|
Zfish   251 DTCNSSLASLR 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pbNP_476669.3 Homeodomain 199..255 CDD:459649 28/55 (51%)
pitx3NP_991238.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..69 14/48 (29%)
Homeodomain 61..117 CDD:459649 28/55 (51%)
OAR 251..268 CDD:461067 4/11 (36%)
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 255..268 4/7 (57%)
Nuclear localization signal. /evidence=ECO:0000250|UniProtKB:O35160 260..264 1/2 (50%)

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