Protein Alignment pb and hoxb9

DIOPT Version :10

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: NP_988879.1
• Gene: hoxb9 / 394474
• XenbaseID: XB-GENE-963094
• Length: 247
• Species: Xenopus tropicalis
• Alignment Length: 276
• Identity: 82/276 - (29%)
• Similarity: 107/276 - (38%)
• Gaps: 93/276 - (33%)

  Fly     8 LDTTSMGTQIK------SESPLNPLQVQTGQTSLPVGGCGGAGVVGGVGGVGVSVGQPGIGQQGV 66
            ||..|...|.|      |.|||||...    :.||                  ||..|.| |||.
 Frog    47 LDFPSCSFQPKAPVFSASWSPLNPHPA----SPLP------------------SVYHPYI-QQGA 88

  Fly    67 PPVPSVLMVNKMTPNCDKRSADTAY---WM----TASEG---GFINSQPSMAEFLNHLSPESPKI 121
            |           ||       :..|   |:    .|..|   |.:.|:              |.:
 Frog    89 P-----------TP-------EGRYLRGWLEPLQRAENGPGQGTVKSE--------------PLL 121

  Fly   122 GTPVGSGAIGGVGVNVNVNVGVGVGYPVGVVPQTPDGMDSVPEYPWMKEKKTSRKSSNNN--NQG 184
            |.|   |.:..:|.. ..|:|            :|...:...|.....:.|....|.:.:  :|.
 Frog   122 GPP---GELDKLGAQ-QYNLG------------SPAAREDANERATFPDNKLCEGSGDKDRTHQS 170

  Fly   185 DNSITEFVPENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNR 249
            :.|.......:.  |:.|..||..|.|||||||.||.||.|.||.|:|..|:|:|||||:|||||
 Frog   171 NPSANWLHARSS--RKKRCPYTKYQTLELEKEFLFNMYLTRDRRHEVARLLNLSERQVKIWFQNR 233

  Fly   250 RMKHKRQTLSKTDDED 265
            |||.|:  |:|...:|
 Frog   234 RMKMKK--LNKDQSKD 247

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	36/55 (65%)
hoxb9	NP_988879.1	Hox9_act	1..169	CDD:461369	40/192 (21%)
		Homeodomain	183..239	CDD:459649	36/55 (65%)