Protein Alignment pb and Gsx2

DIOPT Version :9

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: NP_001131035.2
• Gene: Gsx2 / 364140
• RGDID: 1308047
• Length: 305
• Species: Rattus norvegicus
• Alignment Length: 277
• Identity: 79/277 - (28%)
• Similarity: 114/277 - (41%)
• Gaps: 74/277 - (26%)

  Fly    33 TSLPVGGCGGAGVVGGVGGVGVSVGQPGI-GQQGVPPVPSVLMVNKMTPNCDKRSADTAYWMTAS 96
            :|.|..|.||    |..|..|.:|...|: |..|..|    |:.::.:|.    ..|..:....|
  Rat    71 SSRPPAGAGG----GATGTAGAAVAGGGVAGGTGALP----LLKSQFSPG----PGDAQFCPRVS 123

  Fly    97 EGGFINSQPSMAEFLNHLSPESPKIGTPVGSGAIGGVGVNVNVNVGVGVGYPVGVVPQTPDGMDS 161
            .....:..|.  ...:|..|:.|      ||.|...............:|:|....|..
  Rat   124 HAHHHHHAPQ--HHHHHHQPQQP------GSAAAAAAAAAAAAAAAAALGHPQHHAPVC------ 174

  Fly   162 VPEYPWMKEKKTSRKSSNNNNQGD----------NSITEFVPENGLPRRLRTAYTNTQLLELEKE 216
                           ::...|..|          .|.|..|| ||  :|:|||:|:|||||||:|
  Rat   175 ---------------AATTYNVSDPRRFHCLTMGGSDTSQVP-NG--KRMRTAFTSTQLLELERE 221

  Fly   217 FHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQ-------------------TLSKTD 262
            |..|.||.|.||||||..|:|:|:|||:||||||:|||::                   ..::::
  Rat   222 FSSNMYLSRLRRIEIATYLNLSEKQVKIWFQNRRVKHKKEGKGASRNNHASCKCVGSQAHYARSE 286

  Fly   263 DEDNKDSLKGDDDQSDS 279
            |||:......::|:..|
  Rat   287 DEDSLSPASANEDKEIS 303

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	COG5576	168..274	CDD:227863	50/134 (37%)
		Homeobox	202..254	CDD:278475	36/51 (71%)
Gsx2	NP_001131035.2	Homeobox	207..260	CDD:395001	37/52 (71%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.810