Protein Alignment pb and bsh

DIOPT Version :10

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: NP_477350.2
• Gene: bsh / 35266
• FlyBaseID: FBgn0000529
• Length: 429
• Species: Drosophila melanogaster
• Alignment Length: 335
• Identity: 79/335 - (23%)
• Similarity: 125/335 - (37%)
• Gaps: 101/335 - (30%)

  Fly    58 QPGIGQQGVPPVPSVLMVNKMTP--NCDKRSADTAYWMTA--SEGGFINSQPSMAEFLNHLSPES 118
            |.|.|....||||:........|  |....:::...:..|  ::.||:...      |.:|||.|
  Fly   168 QLGSGAAQHPPVPTTQPQPPPPPPLNGGSGASNGVLYPNAPYTDHGFLQMT------LGYLSPSS 226

  Fly   119 PKIGT-----PV---------GSGAIGGVGVNVNVNVGVGVGYPVGVVPQTPDGMDSVPEYPWMK 169
               ||     |.         |:...|..|....:.:|:|:|                     :.
  Fly   227 ---GTYKSVDPYFLSQASLFGGAPFFGAPGCVPELALGLGMG---------------------VN 267

  Fly   170 EKKTSRKSSNNNNQGDNSITEFVPENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAAS 234
            ..:..|:                      |:.||.:::.||..|||.|...:||..|.|:|:|.:
  Fly   268 ALRHCRR----------------------RKARTVFSDPQLSGLEKRFEGQRYLSTPERVELATA 310

  Fly   235 LDLTERQVKVWFQNRRMKHKRQTLSKTDDEDNKDSLKGDDDQSDSNSNSKKSCQGCELPSDDIPD 299
            |.|:|.|||.||||||||||:|...:.:..:..|..:.:..:....:.|
  Fly   311 LGLSETQVKTWFQNRRMKHKKQLRRRDNANEPVDFSRSEPGKQPGEATS---------------- 359

  Fly   300 STSNSRGHNNNTPSATNNNPSAGNLTPNSSLETGISSNLMGSTTVSASNVISADSSVASSVSLDE 364
            |:.:|: |....|.:....|:    .|.|..:..:.....|.:|...|: :.|||.       ||
  Fly   360 SSGDSK-HGKLNPGSVGGTPT----QPTSEQQLQMCLMQQGYSTDDYSD-LEADSG-------DE 411

  Fly   365 DIEESSPIKV 374
            |  .||.:.:
  Fly   412 D--NSSDVDI 419

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	30/55 (55%)
bsh	NP_477350.2	Homeodomain	275..331	CDD:459649	30/55 (55%)