Protein Alignment pb and Pph13

DIOPT Version :10

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: NP_477330.1
• Gene: Pph13 / 33239
• FlyBaseID: FBgn0023489
• Length: 357
• Species: Drosophila melanogaster
• Alignment Length: 545
• Identity: 110/545 - (20%)
• Similarity: 164/545 - (30%)
• Gaps: 226/545 - (41%)

  Fly   199 RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLSKTDD 263
            ||.||.:...||.|||:.|....|.....|.|:|..:||||.:|:|||||||.|.::|
  Fly    11 RRYRTTFNTLQLQELERAFQRTHYPDVFFREELAVRIDLTEARVQVWFQNRRAKWRKQ------- 68

  Fly   264 EDNKDSLKGDDDQSDSNSNSKKSCQGCELPSDDIPDSTSNSRGHNNNTPSATNNNPSAGNLTPNS 328
             :....|.||         .|:.....::..||                               |
  Fly    69 -EKIGGLGGD---------YKEGALDLDVSYDD-------------------------------S 92

  Fly   329 SLETGISSNLMGSTTVSASNVISADSSVASSVSLDEDIEESSPIKVKKKDDGQVIKKEAVSTSSK 393
            ::...:.|.|.|..|      :..|:...||.|||.:::.|
  Fly    93 AVLGQLDSALGGGGT------LLPDTPPQSSNSLDNELKAS------------------------ 127

  Fly   394 ASPFGYENSTPSLVSFRRDSDASAVGNAPTSKAVGKKRFQSAANAIATPTPLSDSNSGNGSGGGP 458
               :|....:||.:|                           .|....   |:..:.|...||..
  Fly   128 ---YGTGAMSPSRLS---------------------------PNIFLN---LNIDHLGLERGGSG 159

  Fly   459 AGGYFPGYYPSPKQQQQVQQQQLHPQ---QQQLPQQQPQDYYGKYDIEFAASPHHNPHNKQQALH 520
            ....:..|.|.       .|.|.|||   ..||.|..||.:        |:.|.|
  Fly   160 LSMEWSTYPPQ-------TQAQTHPQMDSDNQLQQHPPQQH--------ASDPIH---------- 199

  Fly   521 GEYLSPKPSSANFHQNSQQQQQNDHFYYNYNDTNGTPYLNHQQQHHHHAQHHQQQQHHQNHVADF 585
                   ..|::.||  |||||                             |||:||:.......
  Fly   200 -------AGSSSHHQ--QQQQQ-----------------------------HQQEQHNPQLHPGL 226

  Fly   586 EGPVNGPSNFNNG-AYYDNMSF------QQQAQAHQHQTVVFQQQQPHQPAAINHQHMHHLGNGE 643
            |...:...:..:| :.||.|.|      |....:.:...::..:|...|...   .|...:|:..
  Fly   227 EFAASLSLDMTDGSSAYDEMKFLSVDVDQFTIDSFKADCILSMEQSQMQAYG---GHSQLVGSSN 288

  Fly   644 TYSALGLQMENCEGYNNFGAAGTGGGYYEAGQ--QPP--------IPATHGHGHHPHHVQVPAQA 698
            .....|:      |.::||        .|.|:  .||        :|:          :.:..:.
  Fly   289 ELCLDGI------GMSSFG--------MEEGEPKSPPSLLVLDKSLPS----------LSIGVEG 329

  Fly   699 HAPI-----HAHHNSAAIPGGVGVG 718
            .|.:     |..|....:.|||..|
  Fly   330 IADLVEQLHHHQHEGGPVGGGVITG 354

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	27/55 (49%)
Pph13	NP_477330.1	Homeodomain	11..67	CDD:459649	27/55 (49%)