Protein Alignment pb and B-H1

DIOPT Version :10

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: NP_523387.1
• Gene: B-H1 / 32724
• FlyBaseID: FBgn0011758
• Length: 544
• Species: Drosophila melanogaster
• Alignment Length: 460
• Identity: 106/460 - (23%)
• Similarity: 158/460 - (34%)
• Gaps: 108/460 - (23%)

  Fly    43 AGVVGGVGGVGVSVGQPGIGQQGVPPV-----PSVLM-----VNKMTPNCDKRSADTAYWMTASE 97
            |..|.|||.:..::..|    |..||.     |..||     :....|.......:.|.:..|.:
  Fly   134 ASNVAGVGVLPSALHHP----QPHPPTHPHTHPHALMHPHGKLGHFPPTAGGNGLNVAQYAAAMQ 194

  Fly    98 GGFINSQPSMAEFLNHLSPESPKIGTPVGSGAIGGVG---VNVNVNVGVGVGYPVGVVPQTPDGM 159
            ..:..:..:.|...|     :........:.|..||.   |:..|:.|||:..|.|      ..:
  Fly   195 QHYAAAAAAAAARNN-----AAAAAAAAAAAAAAGVAAPPVDGGVDGGVGLAPPAG------GDL 248

  Fly   160 DSVPEYPWMKEK------------KTSRKSSNNNNQGDNSITEFVPENGLPRRLRTAYTNTQLLE 212
            |...:|....|.            ....|..:.|:....|.::....:...|:.|||:|:.||..
  Fly   249 DDSSDYHEENEDCDSGNMDDHSVCSNGGKDDDGNSVKSGSTSDMSGLSKKQRKARTAFTDHQLQT 313

  Fly   213 LEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQT------LSKTDDEDNKDSLK 271
            |||.|...|||....|.|:|..|||::.|||.|:||||.|.||||      |::..:......|.
  Fly   314 LEKSFERQKYLSVQERQELAHKLDLSDCQVKTWYQNRRTKWKRQTAVGLELLAEAGNFAAFQRLY 378

  Fly   272 GDDDQSDSNSNSKKSCQGCELPSDDIPDSTSNSRGHNN-------NTPSATNNNPSAGNL---TP 326
            |......:            .|......:...:..|.|       ...:|....|...||   .|
  Fly   379 GGSPYLGA------------WPYAAAAGAAHGATPHTNIDIYYRQAAAAAAMQKPLPYNLYAGVP 431

  Fly   327 NSSLETGISSNLMGSTTVSASNVISADSSVASSVSLDEDIEESSPIKVKKKDDGQVIKKEAVSTS 391
            :..:..|:.......:.:|||:.:|:.||...|                           |.:.:
  Fly   432 SVGVGVGVGVGPAPFSHLSASSSLSSLSSYYQS---------------------------AAAAA 469

  Fly   392 SKASPFGYENSTPSLVSFRRDSDASAVGNAPTSKAVGKKRFQSAANAIATPTPLSDSN-SGNGSG 455
            |.|:|.|.....|         ..|..|.:|.|   |..:...|.:|.|:|.|...|. |...:.
  Fly   470 SAANPGGPHPVAP---------PPSVGGGSPPS---GLVKPIPAHSASASPPPRPPSTPSPTLNP 522

  Fly   456 GGPAG 460
            |.|.|
  Fly   523 GSPPG 527

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	29/55 (53%)
B-H1	NP_523387.1	Homeodomain	300..356	CDD:459649	29/55 (53%)