DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pb and HOXD8

DIOPT Version :9

Sequence 1:NP_476669.3 Gene:pb / 40826 FlyBaseID:FBgn0051481 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_062458.1 Gene:HOXD8 / 3234 HGNCID:5139 Length:290 Species:Homo sapiens


Alignment Length:275 Identity:84/275 - (30%)
Similarity:108/275 - (39%) Gaps:84/275 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 PVG-GCGGAGVVG----GVGGVGVSVGQPGIGQQGVPPVPSVLMVNKMTPNCDKRSADTAYWMTA 95
            |.| ||||....|    ..||     |.|....|..||.|.........|.|             
Human    78 PSGTGCGGREGRGQEYFHPGG-----GSPAAAYQAAPPPPPHPPPPPPPPPC------------- 124

  Fly    96 SEGGF-INSQPSMAEFLNHLSPESPKIGTPVGSGAIGGVGVNVNVNVGVGVGYP-----VGVVPQ 154
              ||. .:.:|  |:|..:.:.:...|.|......:              |.||     .|.:.:
Human   125 --GGIACHGEP--AKFYGYDNLQRQPIFTTQQEAEL--------------VQYPDCKSSSGNIGE 171

  Fly   155 TPDGMD--SVPE--YPWMKEKKTSRKSSNNNNQGDNSITEFVPENGLPRRLRTAYTNTQLLELEK 215
            .||.::  |.|.  :|||:.:....:                      ||.|..|:..|.|||||
Human   172 DPDHLNQSSSPSQMFPWMRPQAAPGR----------------------RRGRQTYSRFQTLELEK 214

  Fly   216 EFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLSKTDDEDNKDSLKGDDDQSDSN 280
            ||.||.||.|.||||::.:|.|||||||:||||||||.|:        |:|||... ...|...:
Human   215 EFLFNPYLTRKRRIEVSHALALTERQVKIWFQNRRMKWKK--------ENNKDKFP-VSRQEVKD 270

  Fly   281 SNSKKSCQGCELPSD 295
            ..:||..|  ||..|
Human   271 GETKKEAQ--ELEED 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pbNP_476669.3 COG5576 168..274 CDD:227863 43/105 (41%)
Homeobox 202..254 CDD:278475 35/51 (69%)
HOXD8NP_062458.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 60..127 18/68 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 161..200 9/60 (15%)
Homeobox 201..253 CDD:278475 35/51 (69%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 255..290 11/32 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.810

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