DRSC/TRiP Functional Genomics Resources

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Protein Alignment pb and HOXB8

DIOPT Version :9

Sequence 1:NP_476669.3 Gene:pb / 40826 FlyBaseID:FBgn0051481 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_076921.1 Gene:HOXB8 / 3218 HGNCID:5119 Length:243 Species:Homo sapiens


Alignment Length:151 Identity:51/151 - (33%)
Similarity:67/151 - (44%) Gaps:52/151 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   157 DGMDSVPE----YPWMKEKKTSRKSSNNNNQGDNSITEFVPENGLPRRLRTAYTNTQLLELEKEF 217
            :|.:..|.    :|||:.:..:.:                      ||.|..|:..|.|||||||
Human   123 EGSEQSPSPTQLFPWMRPQAAAGR----------------------RRGRQTYSRYQTLELEKEF 165

  Fly   218 HFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLSKTDDEDNKDSLKGDD-------- 274
            .||.||.|.||||::.:|.|||||||:||||||||.|:        |:|||......        
Human   166 LFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKK--------ENNKDKFPSSKCEQEELEK 222

  Fly   275 ----------DQSDSNSNSKK 285
                      |:.|:....||
Human   223 QKLERAPEAADEGDAQKGDKK 243

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pbNP_476669.3 COG5576 168..274 CDD:227863 43/105 (41%)
Homeobox 202..254 CDD:278475 35/51 (69%)
HOXB8NP_076921.1 Antp-type hexapeptide 134..139 2/4 (50%)
Homeobox 150..203 CDD:395001 35/52 (67%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 203..243 6/47 (13%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.810

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