DRSC/TRiP Functional Genomics Resources

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Protein Alignment pb and HOXB5

DIOPT Version :9

Sequence 1:NP_476669.3 Gene:pb / 40826 FlyBaseID:FBgn0051481 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_002138.1 Gene:HOXB5 / 3215 HGNCID:5116 Length:269 Species:Homo sapiens


Alignment Length:193 Identity:65/193 - (33%)
Similarity:88/193 - (45%) Gaps:58/193 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 TPNCDKRSADTAYWMTASEGGFINSQPSMAEFLNHLSPESPKIG----TPVGSGAIGGVGVNVNV 139
            :|:....||.::...|..:....:|:|.  |..:.||  ||.:.    .|:.:....        
Human   116 SPSDQATSASSSANFTEIDEASASSEPE--EAASQLS--SPSLARAQPEPMATSTAA-------- 168

  Fly   140 NVGVGVGYPVGVVPQTPDGMDSVPEYPWMKEKKTSRKSSNNNNQGDNSITEFVPENGLPRRLRTA 204
                    |.|..||.         :|||::...|...:.             |:.   :|.|||
Human   169 --------PEGQTPQI---------FPWMRKLHISHDMTG-------------PDG---KRARTA 200

  Fly   205 YTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLSKTDDEDNK 267
            ||..|.||||||||||:||.|.||||||.:|.|:|||:|:||||||||.|:         |||
Human   201 YTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRMKWKK---------DNK 254

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pbNP_476669.3 COG5576 168..274 CDD:227863 47/100 (47%)
Homeobox 202..254 CDD:278475 39/51 (76%)
HOXB5NP_002138.1 PRK07003 <67..>171 CDD:235906 13/74 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 77..173 14/76 (18%)
Antp-type hexapeptide 176..181 2/13 (15%)
Homeobox 198..251 CDD:395001 39/52 (75%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.810

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