DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment pb and HOXB4

DIOPT Version :9

Sequence 1:NP_476669.3 Gene:pb / 40826 FlyBaseID:FBgn0051481 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_076920.1 Gene:HOXB4 / 3214 HGNCID:5115 Length:251 Species:Homo sapiens


Alignment Length:263 Identity:72/263 - (27%)
Similarity:98/263 - (37%) Gaps:99/263 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 PGIGQQGVPPVPSVLMVNKMTPNCDKRSADTAYWMTASEGGFINSQPSMAEFLNHLSPESPKIGT 123
            ||:..:...|.|:..::.:....|:..|:..             ..|..|:...|.||.......
Human    87 PGLSPRAPAPPPAGALLPEPGQRCEAVSSSP-------------PPPPCAQNPLHPSPSHSACKE 138

  Fly   124 PVGSGAIGGVGVNVNVNVGVGVGYPVGVVPQTPDGMDSVPEYPWMKEKKTSRKSSNNNNQGDNSI 188
            ||                                      .||||::...|  :.|.|..|    
Human   139 PV--------------------------------------VYPWMRKVHVS--TVNPNYAG---- 159

  Fly   189 TEFVPENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKH 253
                   |.|:|.|||||..|:||||||||:|:||.|.||:|||.:|.|:|||:|:||||||||.
Human   160 -------GEPKRSRTAYTRQQVLELEKEFHYNRYLTRRRRVEIAHALCLSERQIKIWFQNRRMKW 217

  Fly   254 KRQTLSKTDDEDNKDSLKGDDDQSDSNSNSKKSCQGCELPSDDIPDSTSNSRGHNNNTPSATNNN 318
            |:         |:|                        ||:..|  .:..:.|.....|...|..
Human   218 KK---------DHK------------------------LPNTKI--RSGGAAGSAGGPPGRPNGG 247

  Fly   319 PSA 321
            |.|
Human   248 PRA 250

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pbNP_476669.3 COG5576 168..274 CDD:227863 48/105 (46%)
Homeobox 202..254 CDD:278475 37/51 (73%)
HOXB4NP_076920.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..134 11/59 (19%)
Antp-type hexapeptide 141..146 3/4 (75%)
Homeobox 165..218 CDD:278475 37/52 (71%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 220..251 10/57 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000007
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.810

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