DRSC/TRiP Functional Genomics Resources

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Protein Alignment pb and HOXB2

DIOPT Version :10

Sequence 1:NP_476669.3 Gene:pb / 40826 FlyBaseID:FBgn0051481 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_002136.1 Gene:HOXB2 / 3212 HGNCID:5113 Length:356 Species:Homo sapiens


Alignment Length:339 Identity:123/339 - (36%)
Similarity:156/339 - (46%) Gaps:63/339 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 EGGFINSQPSMAEFLNHLS-----------PESPKIGTP---------VGSGAIGGVGVNVNVNV 141
            |.||||||||:||.|....           .||..|..|         :..||............
Human     8 EIGFINSQPSLAECLTSFPAVLETFQTSSIKESTLIPPPPPFEQTFPSLQPGASTLQRPRSQKRA 72

  Fly   142 GVGVGYPVGVVPQTPDGMDSVPEYPWMKEKKTSRKSSNNNNQGDNSITEFVPEN---------GL 197
            ..|...|....|..| .....||:|||||||:::|.|.:.. ..:.....||.:         ||
Human    73 EDGPALPPPPPPPLP-AAPPAPEFPWMKEKKSAKKPSQSAT-SPSPAASAVPASGVGSPADGLGL 135

  Fly   198 P-------RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKR 255
            |       ||||||||||||||||||||||||||||||:||||.|||||||||||||||||||||
Human   136 PEAGGGGARRLRTAYTNTQLLELEKEFHFNKYLCRPRRVEIAALLDLTERQVKVWFQNRRMKHKR 200

  Fly   256 QTLSKTDDEDNKDSLKGD-DDQSD----------SNSNSKKSCQGCELPSDDIPDSTS------- 302
            ||..: :..|.:.:..|. :|..|          ..|.|:.:.:.|..|.:.:|.:.|       
Human   201 QTQHR-EPPDGEPACPGALEDICDPAEEPAASPGGPSASRAAWEACCHPPEVVPGALSADPRPLA 264

  Fly   303 -NSRGHNNNTPSATNNNPSAGNLTPNSSLETGISSNLMGSTTVSASNVISADSSVASSVSLDEDI 366
             ...|...::|.....  .||.|.| ..|...:.|....|..:...|..:|||.:..|..|...:
Human   265 VRLEGAGASSPGCALR--GAGGLEP-GPLPEDVFSGRQDSPFLPDLNFFAADSCLQLSGGLSPSL 326

  Fly   367 EES--SPIKVKKKD 378
            :.|  ||:...:::
Human   327 QGSLDSPVPFSEEE 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pbNP_476669.3 Homeodomain 199..255 CDD:459649 53/55 (96%)
HOXB2NP_002136.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 39..142 26/104 (25%)
Antp-type hexapeptide 94..99 3/4 (75%)
Homeodomain 144..200 CDD:459649 53/55 (96%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 197..240 12/43 (28%)

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