DRSC/TRiP Functional Genomics Resources

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Protein Alignment pb and HOXA10

DIOPT Version :10

Sequence 1:NP_476669.3 Gene:pb / 40826 FlyBaseID:FBgn0051481 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_061824.3 Gene:HOXA10 / 3206 HGNCID:5100 Length:410 Species:Homo sapiens


Alignment Length:321 Identity:89/321 - (27%)
Similarity:114/321 - (35%) Gaps:114/321 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 QTSLPVGGCGGAGVVGGVGGVGVSV-----------------GQPGIGQQGVPPVP--------- 70
            :.:.|..|.||.|:..|..|.|.|.                 |.|...||..||.|         
Human    90 EAASPGSGGGGGGLGPGAHGYGPSPIDLWLDAPRSCRMEPPDGPPPPPQQQPPPPPQPPQPAPQA 154

  Fly    71 ------------SVLMVNKMTPNCDKRSADTAYWMTASEGGFINSQPSMAEFLNHLSPESPKIGT 123
                        |...:......|.|.||      ||:|         :|.|.....|:...:||
Human   155 TSCSFAQNIKEESSYCLYDSADKCPKVSA------TAAE---------LAPFPRGPPPDGCALGT 204

  Fly   124 ----PV----------------GSGAIG----GVGVNVNVNVGVGVGYPVGVVPQTPD------G 158
                ||                |||..|    |.|.......|.|...|..:...:.|      .
Human   205 SSGVPVPGYFRLSQAYGTAKGYGSGGGGAQQLGAGPFPAQPPGRGFDLPPALASGSADAARKERA 269

  Fly   159 MDSVP-----------------------------EYPWMKEKKTSRKSSNNNNQGDNSITEFVPE 194
            :||.|                             ..|....|.:..|.|..|::|:|:......:
Human   270 LDSPPPPTLACGSGGGSQGDEEAHASSSAAEELSPAPSESSKASPEKDSLGNSKGENAANWLTAK 334

  Fly   195 NGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKR 255
            :|  |:.|..||..|.|||||||.||.||.|.||:||:.|:.||:||||:||||||||.|:
Human   335 SG--RKKRCPYTKHQTLELEKEFLFNMYLTRERRLEISRSVHLTDRQVKIWFQNRRMKLKK 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pbNP_476669.3 Homeodomain 199..255 CDD:459649 36/55 (65%)
HOXA10NP_061824.3 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 89..158 16/67 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 221..339 22/119 (18%)
Homeodomain 337..393 CDD:459649 36/55 (65%)

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