Protein Alignment pb and msx1a

DIOPT Version :10

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: NP_571348.1
• Gene: msx1a / 30527
• ZFINID: ZDB-GENE-980526-312
• Length: 233
• Species: Danio rerio
• Alignment Length: 178
• Identity: 51/178 - (28%)
• Similarity: 73/178 - (41%)
• Gaps: 49/178 - (27%)

  Fly   105 PSMAEFLNHLSPESPKIGTPVGSGAIGGVGVNVNVNVGVGVGYPVGVVPQTPDGMDSVPEYPWMK 169
            |...|.|  ::...|..|:|               :....:|:.|.|: |.|...:|.....|:.
Zfish    43 PFSVEAL--MADRRPNRGSP---------------DADARLGFSVEVL-QLPVKAESPERSTWVP 89

  Fly   170 EKKTS-----------RKSSNNNNQGDNSITEFVPENGLPRRLRTAYTNTQLLELEKEFHFNKYL 223
            ..:.|           ||...|                  |:.||.::..|||.||::|...:||
Zfish    90 RARFSPSRLSPPACPLRKHKTN------------------RKPRTPFSTAQLLALERKFRQKQYL 136

  Fly   224 CRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLSKTDDEDNKDSLK 271
            ....|.|.::||.|||.|||:||||||.|.||  |.:.:.|..|.:.|
Zfish   137 SIAERAEFSSSLSLTETQVKIWFQNRRAKAKR--LQEAELEKLKMAAK 182

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	28/55 (51%)
msx1a	NP_571348.1	Homeodomain	112..168	CDD:459649	28/55 (51%)