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Protein Alignment pb and hoxc3a
DIOPT Version :9
Sequence 1: | NP_476669.3 |
Gene: | pb / 40826 |
FlyBaseID: | FBgn0051481 |
Length: | 782 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001128157.2 |
Gene: | hoxc3a / 30421 |
ZFINID: | ZDB-GENE-980526-532 |
Length: | 263 |
Species: | Danio rerio |
Alignment Length: | 162 |
Identity: | 66/162 - (40%) |
Similarity: | 88/162 - (54%) |
Gaps: | 27/162 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 161 SVPEYPWMKE--KKTSRKSSNNNNQGDNSIT--EFVPENGLPRRLRTAYTNTQLLELEKEFHFNK 221
|..:||||:| ..|...|.|....||:..: |.|..|...:|.|.|:|::|||||||||||:.
Zfish 117 STMKYPWMRETHAPTHFSSINAMESGDSKYSNGEAVVRNSSSKRARVAFTSSQLLELEKEFHFSA 181
Fly 222 YLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLSKTDDEDNKDSLKGDDDQSDSNSNSKKS 286
||||.||:|:|..|.||:||:|:||||||||:|: |.:..|.:.|..:
Zfish 182 YLCRNRRLEMAELLKLTDRQIKIWFQNRRMKYKK------------------DHKEKSTAKSSYT 228
Fly 287 CQGCELPSDDIPDSTSNS----RGHNN-NTPS 313
..|.|.....|..||::| :..|| .|||
Zfish 229 YLGTENQPLIISRSTTDSPVPLKFQNNYETPS 260
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E2759_KOG0489 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000007 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.810 |
|
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