Protein Alignment pb and hoxc3a

DIOPT Version :10

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: NP_001128157.3
• Gene: hoxc3a / 30421
• ZFINID: ZDB-GENE-980526-532
• Length: 263
• Species: Danio rerio
• Alignment Length: 162
• Identity: 65/162 - (40%)
• Similarity: 88/162 - (54%)
• Gaps: 27/162 - (16%)

  Fly   161 SVPEYPWMKEKKTSRKSSNNN--NQGDNSIT--EFVPENGLPRRLRTAYTNTQLLELEKEFHFNK 221
            |..:||||:|.......|:.|  ..||:..:  |.|..|...:|.|.|:|::|||||||||||:.
Zfish   117 STMKYPWMRETHELMHFSSINAMESGDSKYSNGEAVVRNSSSKRARVAFTSSQLLELEKEFHFSA 181

  Fly   222 YLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLSKTDDEDNKDSLKGDDDQSDSNSNSKKS 286
            ||||.||:|:|..|.||:||:|:||||||||:|:                  |.:..|.:.|..:
Zfish   182 YLCRNRRLEMAELLKLTDRQIKIWFQNRRMKYKK------------------DHKEKSTAKSSYT 228

  Fly   287 CQGCELPSDDIPDSTSNS----RGHNN-NTPS 313
            ..|.|.....|..||::|    :..|| .|||
Zfish   229 YLGTENQPLIISRSTTDSPVPLKFQNNYETPS 260

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	37/55 (67%)
hoxc3a	NP_001128157.3	None