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Protein Alignment pb and hoxc5a
DIOPT Version :9
Sequence 1: | NP_476669.3 |
Gene: | pb / 40826 |
FlyBaseID: | FBgn0051481 |
Length: | 782 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_571219.2 |
Gene: | hoxc5a / 30379 |
ZFINID: | ZDB-GENE-980526-533 |
Length: | 233 |
Species: | Danio rerio |
Alignment Length: | 113 |
Identity: | 52/113 - (46%) |
Similarity: | 64/113 - (56%) |
Gaps: | 29/113 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 161 SVPE-YPWMKEKKTSRKSSNNNNQGDNSITEFVPENGLPRRLRTAYTNTQLLELEKEFHFNKYLC 224
|.|: ||||.:...|.:|.. :|.||:||..|.||||||||||:||.
Zfish 147 SQPQIYPWMTKLHMSHESDG-------------------KRSRTSYTRYQTLELEKEFHFNRYLT 192
Fly 225 RPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLSKTDDEDNKDSLKG 272
|.||||||.:|.|.|||:|:||||||||.|: |:|..:||
Zfish 193 RRRRIEIANNLCLNERQIKIWFQNRRMKWKK---------DSKLKVKG 231
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000007 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.910 |
|
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