Protein Alignment pb and hoxd3a

DIOPT Version :10

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: NP_571200.1
• Gene: hoxd3a / 30349
• ZFINID: ZDB-GENE-990415-120
• Length: 396
• Species: Danio rerio
• Alignment Length: 302
• Identity: 92/302 - (30%)
• Similarity: 129/302 - (42%)
• Gaps: 76/302 - (25%)

  Fly    94 TASEGGFINSQPSMAEFLNHLSP---ESPKIGT--------PVGSGAIGGVGVNVNVNVGVGVGY 147
            :||:|   ||||.........:|   .||...|        |..:|:
Zfish    72 SASQG---NSQPESISEQQQAAPLAASSPSPSTNSTQKKKSPSSNGS------------------ 115

  Fly   148 PVGVVPQTPDGMDSVPEYPWMKE-KKTSRKSSNNNNQGDNSITEFVPENGLPRRLRTAYTNTQLL 211
                  .|...:.|...:||||| ::.:::.|.|......:..:..|.....:|:|||||:.||:
Zfish   116 ------STATPVISKQIFPWMKETRQNAKQKSTNCPAAGETCDDKSPPGPASKRVRTAYTSAQLV 174

  Fly   212 ELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLSKTDDEDNK----DSLKG 272
            |||||||||:|||||||:|:|..|:|||||:|:||||||||:|:       |:.:|    ..|..
Zfish   175 ELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKK-------DQKSKGIMHSPLGH 232

  Fly   273 DDDQSDSNSNSKKSCQGCELP-----SDDIPDSTSNSRGHNNNTPSATNNNPSAG---------- 322
            ..|:|...|.|.......:||     |.|.|...|.::...|....|....|..|
Zfish   233 SPDRSPPLSGSNHIGYSGQLPNVNSLSYDAPSPPSFAKPQQNIYGLAAYTAPLGGCIPQQKRYPG 297

  Fly   323 ------NLTPNSSLETGISSNLMGSTTVSASNVISADSSVAS 358
                  ::..|.|.   .::||..|......|.:  ||..||
Zfish   298 TEYDHHSMQGNGSF---ANANLQSSPVYVGGNFV--DSMPAS 334

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	41/55 (75%)
hoxd3a	NP_571200.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	18..163		23/117 (20%)
		COG5576	116..237	CDD:227863	56/127 (44%)
		Antp-type hexapeptide	126..131		2/4 (50%)
		Homeodomain	162..218	CDD:459649	41/55 (75%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	219..246		7/26 (27%)
		DUF4074	333..394	CDD:463833	2/2 (100%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	364..396