Protein Alignment pb and hoxc6a

DIOPT Version :10

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: NP_571198.1
• Gene: hoxc6a / 30346
• ZFINID: ZDB-GENE-990415-113
• Length: 231
• Species: Danio rerio
• Alignment Length: 128
• Identity: 52/128 - (40%)
• Similarity: 69/128 - (53%)
• Gaps: 29/128 - (22%)

  Fly   160 DSVPEYPWMKEKKTSRKSSNNNNQGDNSITEFVPENGLPRRLRTAYTNTQLLELEKEFHFNKYLC 224
            :::..||||:..        |::.|       |......||.|..|:..|.||||||||||:||.
Zfish   119 NNIQIYPWMQRM--------NSHSG-------VGYGSDRRRGRQIYSRYQTLELEKEFHFNRYLT 168

  Fly   225 RPRRIEIAASLDLTERQVKVWFQNRRMKHKRQ--------------TLSKTDDEDNKDSLKGD 273
            |.||||||.:|.|||||:|:||||||||.|::              |..:|:.|..::..|.|
Zfish   169 RRRRIEIANALCLTERQIKIWFQNRRMKWKKETNLTSTVPGTESAGTPQETEKETEEEPKKKD 231

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	39/55 (71%)
hoxc6a	NP_571198.1	Antp-type hexapeptide	123..128		3/4 (75%)
		Homeodomain	143..199	CDD:459649	39/55 (71%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	200..231		4/30 (13%)