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Protein Alignment pb and hoxc6a
DIOPT Version :9
Sequence 1: | NP_476669.3 |
Gene: | pb / 40826 |
FlyBaseID: | FBgn0051481 |
Length: | 782 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_571198.1 |
Gene: | hoxc6a / 30346 |
ZFINID: | ZDB-GENE-990415-113 |
Length: | 231 |
Species: | Danio rerio |
Alignment Length: | 128 |
Identity: | 52/128 - (40%) |
Similarity: | 69/128 - (53%) |
Gaps: | 29/128 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 160 DSVPEYPWMKEKKTSRKSSNNNNQGDNSITEFVPENGLPRRLRTAYTNTQLLELEKEFHFNKYLC 224
:::..||||:.. |::.| |......||.|..|:..|.||||||||||:||.
Zfish 119 NNIQIYPWMQRM--------NSHSG-------VGYGSDRRRGRQIYSRYQTLELEKEFHFNRYLT 168
Fly 225 RPRRIEIAASLDLTERQVKVWFQNRRMKHKRQ--------------TLSKTDDEDNKDSLKGD 273
|.||||||.:|.|||||:|:||||||||.|:: |..:|:.|..::..|.|
Zfish 169 RRRRIEIANALCLTERQIKIWFQNRRMKWKKETNLTSTVPGTESAGTPQETEKETEEEPKKKD 231
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000007 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.910 |
|
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