Protein Alignment pb and hoxb8a

DIOPT Version :10

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: XP_005171620.1
• Gene: hoxb8a / 30343
• ZFINID: ZDB-GENE-990415-108
• Length: 246
• Species: Danio rerio
• Alignment Length: 175
• Identity: 57/175 - (32%)
• Similarity: 77/175 - (44%)
• Gaps: 56/175 - (32%)

  Fly   129 AIGGVGVNVNVNVGVGVGYPVGVVPQTPDGMDSVPE----YPWMKEKKTSRKSSNNNNQGDNSIT 189
            |.||:|                   ...|..:..|.    :|||:.:..:.:
Zfish   114 ATGGIG-------------------DETDNTEQSPSPTQLFPWMRPQVAAGR------------- 146

  Fly   190 EFVPENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHK 254
                     ||.|..|:..|.|||||||.||.||.|.||||::.:|.|||||||:||||||||.|
Zfish   147 ---------RRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK 202

  Fly   255 RQTLSKTDDEDNKD---SLKGDDDQSDSNSNSKKSCQGCELPSDD 296
            :        |:|||   |.|.:.:|.:.....|:...|.:...:|
Zfish   203 K--------ENNKDKFPSSKSEQEQIEKEKREKEQASGTQSAGED 239

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	37/55 (67%)
hoxb8a	XP_005171620.1	Homeodomain	147..203	CDD:459649	37/55 (67%)