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Protein Alignment pb and hoxb8a
DIOPT Version :9
Sequence 1: | NP_476669.3 |
Gene: | pb / 40826 |
FlyBaseID: | FBgn0051481 |
Length: | 782 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_005171620.1 |
Gene: | hoxb8a / 30343 |
ZFINID: | ZDB-GENE-990415-108 |
Length: | 246 |
Species: | Danio rerio |
Alignment Length: | 175 |
Identity: | 57/175 - (32%) |
Similarity: | 77/175 - (44%) |
Gaps: | 56/175 - (32%) |
- Green bases have known domain annotations that are detailed below.
Fly 129 AIGGVGVNVNVNVGVGVGYPVGVVPQTPDGMDSVPE----YPWMKEKKTSRKSSNNNNQGDNSIT 189
|.||:| ...|..:..|. :|||:.:..:.:
Zfish 114 ATGGIG-------------------DETDNTEQSPSPTQLFPWMRPQVAAGR------------- 146
Fly 190 EFVPENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHK 254
||.|..|:..|.|||||||.||.||.|.||||::.:|.|||||||:||||||||.|
Zfish 147 ---------RRGRQTYSRYQTLELEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWK 202
Fly 255 RQTLSKTDDEDNKD---SLKGDDDQSDSNSNSKKSCQGCELPSDD 296
: |:||| |.|.:.:|.:.....|:...|.:...:|
Zfish 203 K--------ENNKDKFPSSKSEQEQIEKEKREKEQASGTQSAGED 239
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E2759_KOG0489 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000007 |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.810 |
|
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