Protein Alignment pb and gsc

DIOPT Version :10

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: NP_571092.1
• Gene: gsc / 30212
• ZFINID: ZDB-GENE-980528-2060
• Length: 240
• Species: Danio rerio
• Alignment Length: 254
• Identity: 67/254 - (26%)
• Similarity: 100/254 - (39%)
• Gaps: 62/254 - (24%)

  Fly    65 GVPPVPSVLMVNKMTPNCDKRSADTAYWMTASEGGFINSQPSMAEFLNHLSPESPKIGTPVGSGA 129
            |.|.....:::::..|.......::.|  ||:  |..|.      ..:|..|.:|.:     ...
Zfish    14 GRPSCKDSVLLHRNAPVVFSNLTESLY--TAA--GDFNG------LYSHTGPPAPNL-----QSV 63

  Fly   130 IGGVGVNVNVNVG-VGVGYPVGVV-------------PQTPDGMDS--------VPEYPWMKEKK 172
            .|.:|.| |...| :.|..|.|..             |..|.|.||        ||
Zfish    64 NGRIGYN-NYYYGQLHVQGPTGPACCGAIPTLGSQQCPCIPTGYDSAGSVLISPVP--------- 118

  Fly   173 TSRKSSNNNNQGDNSITEFVPENGL----PRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAA 233
              .:..:..|.|..|.||....|.|    .||.||.:|:.||..||..|...||.....|.::|.
Zfish   119 --HQMMSYMNVGTLSRTELQLLNQLHCRRKRRHRTIFTDEQLEALENLFQETKYPDVGTREQLAR 181

  Fly   234 SLDLTERQVKVWFQNRRMKHKRQTLSKTDDEDNKD---------SLKGDDDQSDSNSNS 283
            .:.|.|.:|:|||:|||.|.:||..|.:::.:|..         |.|.::.:||.:|:|
Zfish   182 KVHLREEKVEVWFKNRRAKWRRQKRSSSEESENSQKWNKSTKTTSEKIEEGKSDVDSDS 240

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	24/55 (44%)
gsc	NP_571092.1	Homeodomain	147..203	CDD:459649	24/55 (44%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	199..240		10/40 (25%)