DRSC/TRiP Functional Genomics Resources

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Protein Alignment pb and pitx2

DIOPT Version :10

Sequence 1:NP_476669.3 Gene:pb / 40826 FlyBaseID:FBgn0051481 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_571050.1 Gene:pitx2 / 30164 ZFINID:ZDB-GENE-990714-27 Length:314 Species:Danio rerio


Alignment Length:206 Identity:62/206 - (30%)
Similarity:90/206 - (43%) Gaps:51/206 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   169 KEKKTSRKSSNNNNQGDNSITEFVPENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAA 233
            |||..|:...:|::..         :....||.||.:|:.||.|||..|..|:|.....|.|||.
Zfish    62 KEKGQSKNEDSNDDPS---------KKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAV 117

  Fly   234 SLDLTERQVKVWFQNRRMKHKRQTLSKTDDEDNKDSLKGDDDQSDSNSNS-KKSCQGCELPSDDI 297
            ..:|||.:|:|||:|||.|.:::       |.|:        |::...|. .....|...|.||:
Zfish   118 WTNLTEARVRVWFKNRRAKWRKR-------ERNQ--------QAELCKNGFGPQFNGLMQPYDDM 167

  Fly   298 PDSTSNSRGHNNNTPSATNNNPSAGNLTPNSSLET------------GISSNLMGSTTVSASNVI 350
                         .||.|.||.:|..|| ::||.|            .:||..|.|...|.|::.
Zfish   168 -------------YPSYTYNNWAAKGLT-SASLSTKSFPFFNSMNVNPLSSQTMFSPPNSISSMS 218

  Fly   351 SADSSVASSVS 361
            .:.|.|.|:|:
Zfish   219 MSSSMVPSAVT 229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pbNP_476669.3 Homeodomain 199..255 CDD:459649 28/55 (51%)
pitx2NP_571050.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..93 10/39 (26%)
Homeodomain 83..139 CDD:459649 28/55 (51%)
OAR 272..289 CDD:461067
OAR. /evidence=ECO:0000255|PROSITE-ProRule:PRU00138 276..289
Nuclear localization signal. /evidence=ECO:0000255 282..286
Blue background indicates that the domain is not in the aligned region.

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