Protein Alignment pb and Nkx2-8

DIOPT Version :10

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: NP_001100202.1
• Gene: Nkx2-8 / 299061
• RGDID: 1310629
• Length: 234
• Species: Rattus norvegicus
• Alignment Length: 120
• Identity: 38/120 - (31%)
• Similarity: 52/120 - (43%)
• Gaps: 31/120 - (25%)

  Fly   152 VPQTPDGMDSVPEYPWMKEKKTSRKSSNNNNQGDNSITEFVPENGLP----------------RR 200
            ||||.         .|::.:::...||      |.|..|..|.:...                |:
  Rat    34 VPQTA---------AWLESERSHYPSS------DESGLETSPADSSQLASLGRASPGSDAEKRRK 83

  Fly   201 LRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKR 255
            .|..::..|.||||:.|...:||..|.|.::|..|.||..|||:||||.|.|.||
  Rat    84 RRVLFSKAQTLELERRFRQQRYLSAPEREQLARLLRLTPTQVKIWFQNHRYKLKR 138

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	25/55 (45%)
Nkx2-8	NP_001100202.1	Homeodomain	82..138	CDD:459649	25/55 (45%)