Protein Alignment pb and ind

DIOPT Version :10

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: NP_996087.2
• Gene: ind / 2768974
• FlyBaseID: FBgn0025776
• Length: 320
• Species: Drosophila melanogaster
• Alignment Length: 236
• Identity: 72/236 - (30%)
• Similarity: 102/236 - (43%)
• Gaps: 62/236 - (26%)

  Fly    99 GFINSQ---PSMAEFLNHLSPESPKIGTPVGSGAIGGVGV--------NVNVNVGVGVGYPVGVV 152
            ||.|.:   ||.....|..|.:.|.|....||..:||:.:        :.:.:....:.|
  Fly   121 GFSNYEGCYPSPPLSANPNSQQLPPIHNLYGSPVVGGLPLPEPGSFCTSPSASSSASLDY----- 180

  Fly   153 PQTPDGMDSVPEYPWMKEKKTSRKSS---NNNNQGDNSITEFVPENG-LPRRLRTAYTNTQLLEL 213
               .:..|......:..|...|..||   |:::.|...||..:.:.. ..:|:|||:|:||||||
  Fly   181 ---TNNFDEPQGKRFKHESSCSPNSSPLKNHSSGGPVEITPLINDYADSSKRIRTAFTSTQLLEL 242

  Fly   214 EKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLSKTDDEDNKDSLKGDDDQSD 278
            |:||..|.||.|.||||||..|.|:|:|||:||||||:|.|                ||
  Fly   243 EREFSHNAYLSRLRRIEIANRLRLSEKQVKIWFQNRRVKQK----------------KG------ 285

  Fly   279 SNSNSKKSCQGCELPSDDIPDSTSNSRGHNNNTPSATNNNP 319
                      |.|.|       |.|...::|.:|.|:..:|
  Fly   286 ----------GSESP-------TFNLSTNSNGSPQASPVSP 309

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	37/55 (67%)
ind	NP_996087.2	Homeodomain	228..284	CDD:459649	38/71 (54%)