DRSC/TRiP Functional Genomics Resources

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Protein Alignment pb and GBX2

DIOPT Version :10

Sequence 1:NP_476669.3 Gene:pb / 40826 FlyBaseID:FBgn0051481 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_001476.2 Gene:GBX2 / 2637 HGNCID:4186 Length:348 Species:Homo sapiens


Alignment Length:268 Identity:78/268 - (29%)
Similarity:104/268 - (38%) Gaps:66/268 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 SLPVGGCGGAGVVGGVGGVGVSVGQ-PGIGQQGVPPVPSVLMVNKMTP-------NCDKRSADTA 90
            |||.|.|  :.:..|:......:.. || |....|.........|..|       |.||..|..|
Human    85 SLPTGFC--SSLAQGMALTSTLMATLPG-GFSASPQHQEAAAARKFAPQPLPGGGNFDKAEALQA 146

  Fly    91 YWMTASEG-GFINSQPSMAEFLNHLSPESPKIGTPVGSGAIGGVGVNVNVNVGVGVGYPVGVVPQ 154
               .|.:| ||:..:.|:..|         .....|.:..:|.|.         |.|.....|..
Human   147 ---DAEDGKGFLAKEGSLLAF---------SAAETVQASLVGAVR---------GQGKDESKVED 190

  Fly   155 TPDGMDSVPEYPWMKEKKTSRKSSNNNNQGDN--------------SITEFVPENGLP------- 198
            .|.|          ||:..|.:|..:.:..||              ::.|..|.:|..       
Human   191 DPKG----------KEESFSLESDVDYSSDDNLTGQAAHKEEDPGHALEETPPSSGAAGSTTSTG 245

  Fly   199 --RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLSKT 261
              ||.|||:|:.||||||||||..|||....|.:||.:|.|:|.|||:||||||.|.||......
Human   246 KNRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWKRVKAGNA 310

  Fly   262 DDEDNKDS 269
            :.:..:.|
Human   311 NSKTGEPS 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pbNP_476669.3 Homeodomain 199..255 CDD:459649 35/55 (64%)
GBX2NP_001476.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 59..81
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 111..139 5/27 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 179..251 16/90 (18%)
Homeodomain 248..304 CDD:459649 35/55 (64%)
Blue background indicates that the domain is not in the aligned region.

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