DRSC/TRiP Functional Genomics Resources

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Protein Alignment pb and GBX2

DIOPT Version :9

Sequence 1:NP_476669.3 Gene:pb / 40826 FlyBaseID:FBgn0051481 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_001476.2 Gene:GBX2 / 2637 HGNCID:4186 Length:348 Species:Homo sapiens


Alignment Length:268 Identity:78/268 - (29%)
Similarity:104/268 - (38%) Gaps:66/268 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 SLPVGGCGGAGVVGGVGGVGVSVGQ-PGIGQQGVPPVPSVLMVNKMTP-------NCDKRSADTA 90
            |||.|.|  :.:..|:......:.. || |....|.........|..|       |.||..|..|
Human    85 SLPTGFC--SSLAQGMALTSTLMATLPG-GFSASPQHQEAAAARKFAPQPLPGGGNFDKAEALQA 146

  Fly    91 YWMTASEG-GFINSQPSMAEFLNHLSPESPKIGTPVGSGAIGGVGVNVNVNVGVGVGYPVGVVPQ 154
               .|.:| ||:..:.|:..|         .....|.:..:|.|.         |.|.....|..
Human   147 ---DAEDGKGFLAKEGSLLAF---------SAAETVQASLVGAVR---------GQGKDESKVED 190

  Fly   155 TPDGMDSVPEYPWMKEKKTSRKSSNNNNQGDN--------------SITEFVPENGLP------- 198
            .|.|          ||:..|.:|..:.:..||              ::.|..|.:|..       
Human   191 DPKG----------KEESFSLESDVDYSSDDNLTGQAAHKEEDPGHALEETPPSSGAAGSTTSTG 245

  Fly   199 --RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLSKT 261
              ||.|||:|:.||||||||||..|||....|.:||.:|.|:|.|||:||||||.|.||......
Human   246 KNRRRRTAFTSEQLLELEKEFHCKKYLSLTERSQIAHALKLSEVQVKIWFQNRRAKWKRVKAGNA 310

  Fly   262 DDEDNKDS 269
            :.:..:.|
Human   311 NSKTGEPS 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pbNP_476669.3 COG5576 168..274 CDD:227863 47/125 (38%)
Homeobox 202..254 CDD:278475 33/51 (65%)
GBX2NP_001476.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 59..81
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 111..139 5/27 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 179..251 16/90 (18%)
Homeobox 250..303 CDD:306543 33/52 (63%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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