DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment pb and CG30480

DIOPT Version :9

Sequence 1:	NP_476669.3	Gene:	pb / 40826	FlyBaseID:	FBgn0051481	Length:	782	Species:	Drosophila melanogaster
Sequence 2:	NP_001260976.1	Gene:	CG30480 / 246640	FlyBaseID:	FBgn0050480	Length:	920	Species:	Drosophila melanogaster

Alignment Length:	224	Identity:	35/224 - (15%)
Similarity:	55/224 - (24%)	Gaps:	119/224 - (53%)

- Green bases have known domain annotations that are detailed below.

  Fly   554 NGTPYLNHQQQHHHHAQHHQQQQHHQNHVADFEGPVNGPSNFNNGAYYDNMSFQQQAQAHQHQTV 618
            :|:....|:..||||..||    ||:.                          |:..:....:.|
  Fly    35 DGSVAPKHRHHHHHHRHHH----HHER--------------------------QENVEVVATEEV 69

  Fly   619 VFQQQQPHQPAAINHQHMHHLGNGETYSALGLQMENCEGYNNFGAAGTGGGYYEAGQQPPIPATH 683
            :..:..|.     :.:|.||                               .......||:|.|
  Fly    70 ILVENAPK-----SRKHHHH-------------------------------KQRTSPPPPLPQT- 97

  Fly   684 GHGHHPHHVQVPAQAHAPIHAHHNSAAIPGGVGVGPP---PSHIHGFAINGGPAVQGQAFGNNGS 745
                                              .||   |:...||.:...|    |||.|..|
  Fly    98 ----------------------------------SPPFLTPTEEVGFNVVWEP----QAFWNQPS 124

  Fly   746 TAAGT-----------AAISGLENSNSSD 763
            ....|           .|:..::.:::||
  Fly   125 PNPSTDLDLSQDNEVVDAVETMDTTSASD 153

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID
pb	NP_476669.3	COG5576	168..274	CDD:227863
pb	NP_476669.3	Homeobox	202..254	CDD:278475
CG30480	NP_001260976.1	PRK10263	<499..>757	CDD:236669
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45439786
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.930