Protein Alignment pb and Gbx1

DIOPT Version :9

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: NP_001258382.1
• Gene: Gbx1 / 246149
• RGDID: 621864
• Length: 425
• Species: Rattus norvegicus
• Alignment Length: 292
• Identity: 83/292 - (28%)
• Similarity: 105/292 - (35%)
• Gaps: 100/292 - (34%)

  Fly    22 PLNPLQVQTGQTSLPVGGCGGAG-VVGGVGGVGV---SVGQPGIGQQGVPPVPSVL------MVN 76
            ||.||....|:.|...  |.|.| .|..:..:..   |..:|.....|.|.:.:..      .|:
  Rat   131 PLAPLASFAGRLSNTF--CAGLGQAVPSMVALTTALPSFAEPPDAYYGPPELAAAAAAAAASTVS 193

  Fly    77 KMTPNCDKRSADTAYWMTASE-------------------GGFINSQPSM-AEFLNHLSPE---S 118
            :..|....|..|.|  :.|.|                   ..|..:.||: ||...:.|.|   .
  Rat   194 RSNPEPPARRTDGA--LDADELLPAREKVTEPPPPPPPPPPHFSETFPSLPAEGKVYSSDEEKLE 256

  Fly   119 PKIGTPVGS-----------------------GAIGGVGVNVNVNVGVGV--GYPVGVVPQTPDG 158
            |..|.|.||                       ||:.|....:..::|.|.  |.||.....||.|
  Rat   257 PPAGEPAGSEPEEEGSGGDSEDSFLDSSAGGPGALLGPKPKLKGSLGTGAEEGTPVATGVTTPGG 321

  Fly   159 MDSVPEYPWMKEKKTSRKSSNNNNQGDNSITEFVPENGLPRRLRTAYTNTQLLELEKEFHFNKYL 223
                             ||                     ||.|||:|:.||||||||||..|||
  Rat   322 -----------------KS---------------------RRRRTAFTSEQLLELEKEFHCKKYL 348

  Fly   224 CRPRRIEIAASLDLTERQVKVWFQNRRMKHKR 255
            ....|.:||.:|.|:|.|||:||||||.|.||
  Rat   349 SLTERSQIAHALKLSEVQVKIWFQNRRAKWKR 380

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	COG5576	168..274	CDD:227863	39/88 (44%)
		Homeobox	202..254	CDD:278475	33/51 (65%)
Gbx1	NP_001258382.1	Homeobox	326..379	CDD:278475	33/52 (63%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E2759_KOG0489
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	3	2.810