DRSC/TRiP Functional Genomics Resources

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Protein Alignment pb and Bsx

DIOPT Version :10

Sequence 1:NP_476669.3 Gene:pb / 40826 FlyBaseID:FBgn0051481 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_839976.1 Gene:Bsx / 244813 MGIID:2669849 Length:232 Species:Mus musculus


Alignment Length:170 Identity:55/170 - (32%)
Similarity:80/170 - (47%) Gaps:46/170 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   146 GYPVGVVPQTPDGMDSVPEYPWMKEKKTSRKSSNNNNQGDNSITEFVPENGLP------------ 198
            |||  ::| ||..:.....:|..|              ||:....|:..:|:|            
Mouse    55 GYP--LMP-TPTLLTPHAHHPLHK--------------GDHHHPYFLTTSGMPVPALFPHPQHAE 102

  Fly   199 --------RRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKR 255
                    |:.||.::::||..|||.|...:||..|.|:|:|.:|.|:|.|||.||||||||||:
Mouse   103 LPGKHCRRRKARTVFSDSQLSGLEKRFEIQRYLSTPERVELATALSLSETQVKTWFQNRRMKHKK 167

  Fly   256 QTLSKTDDEDNKDSLKGDDDQSDSNSNSKKSCQGCELPSD 295
            | |.|:.||...      .|..:|...|.::.:|.  |:|
Mouse   168 Q-LRKSQDEPKA------ADGPESPEGSPRAPEGA--PAD 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pbNP_476669.3 Homeodomain 199..255 CDD:459649 30/55 (55%)
BsxNP_839976.1 Homeodomain 111..167 CDD:459649 30/55 (55%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 160..232 18/48 (38%)

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