Protein Alignment pb and Vax1

DIOPT Version :10

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: NP_033527.1
• Gene: Vax1 / 22326
• MGIID: 1277163
• Length: 338
• Species: Mus musculus
• Alignment Length: 390
• Identity: 91/390 - (23%)
• Similarity: 138/390 - (35%)
• Gaps: 107/390 - (27%)

  Fly   102 NSQPSMAEFLNHLSPESPKIGTPVGS----------GAIGGVGVNVNVNVGVGVGYPVGVVPQTP 156
            :|....|....:...||.:|....||          ||..|.|.:.:.|             ::.
Mouse    13 HSDTEAARVSKNAHKESREIKGAEGSLPAAFLKEPQGAFSGSGASEDCN-------------KSK 64

  Fly   157 DGMDSVPEYPWMKEKKTSRKSSNNNNQGDNSITEFVPENGL----PRRLRTAYTNTQLLELEKEF 217
            ....:.|:|        .|:....:.:|  ||.|.:...||    |:|.||::|..||..||.||
Mouse    65 SNSSADPDY--------CRRILVRDAKG--SIREIILPKGLDLDRPKRTRTSFTAEQLYRLEMEF 119

  Fly   218 HFNKYLCRPRRIEIAASLDLTERQVKVWFQNRRMKHKRQTLSKTDDEDNKDSLKGDDDQSDSNSN 282
            ...:|:....|.|:|..|:|:|.||||||||||.|.|:        :..|||     :.....|.
Mouse   120 QRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKK--------DQGKDS-----ELRSVVSE 171

  Fly   283 SKKSC-------QGCELPSDDIPDSTSNSRGHNNNTPSATNNNPSAGNLTPNSSLETGISSNLMG 340
            :..:|       ||..|....:|...         .|.||.   :.|:.....||....:....|
Mouse   172 TAATCSVLRLLEQGRLLSPPGLPALL---------PPCATG---ALGSALRGPSLPALGAGAAAG 224

  Fly   341 STTVSASNVISADSSVASSVSLDEDIEESSPIKVKKKDDGQVIKKEAVSTSSKASPFG------- 398
            |...:|:...:.....|.:.|..:.....:|                  ....|.|.|
Mouse   225 SAAAAAAAAAATAPGPAGAASQHQPAVGGAP------------------GPGPAGPGGLHAGAPT 271

  Fly   399 -----YENSTPSLVSFRRDSDASAVGNAPTSKA---VGKKRFQSAANAIATP-TPLSDSNSGNGS 454
                 :....|||:.    |.||.:.:||.:.|   .|..:..||....::. .|.|.:|:..|:
Mouse   272 ASHGLFSLPVPSLLG----SVASRLSSAPLTMAGSLAGNLQELSARYLSSSAFEPYSRTNNKEGA 332

  Fly   455  454
            Mouse   333  332

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	28/55 (51%)
Vax1	NP_033527.1	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..69		12/68 (18%)
		Homeodomain	101..157	CDD:459649	28/55 (51%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	239..269		6/47 (13%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	318..338		4/15 (27%)