DRSC/TRiP Functional Genomics Resources

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Protein Alignment pb and Tlx2

DIOPT Version :10

Sequence 1:NP_476669.3 Gene:pb / 40826 FlyBaseID:FBgn0051481 Length:782 Species:Drosophila melanogaster
Sequence 2:NP_033418.1 Gene:Tlx2 / 21909 MGIID:1350935 Length:284 Species:Mus musculus


Alignment Length:170 Identity:52/170 - (30%)
Similarity:78/170 - (45%) Gaps:21/170 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   115 SPESPKIGTPVGSGAIGGVGVNVNVNVGVGVGYPVGVVPQTP--------DGMDSVPEYPWM--- 168
            :|.......|.|||...|..:.|..:..:.|..|.|..|..|        .|:..: .:|||   
Mouse    61 APAGSLASLPRGSGVGPGGVIRVPAHRPLPVPPPSGAAPAVPGPSGLGGAGGLAGL-TFPWMDSG 124

  Fly   169 ----KEKKTSRKS--SNNNNQGDNSITEFVPENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPR 227
                |::.|:..|  |.....|........|:...|   ||:::.:|:||||:.|...|||....
Mouse   125 RRFAKDRLTAALSPFSGTRRIGHPYQNRTPPKRKKP---RTSFSRSQVLELERRFLRQKYLASAE 186

  Fly   228 RIEIAASLDLTERQVKVWFQNRRMKHKRQTLSKTDDEDNK 267
            |..:|.:|.:|:.|||.||||||.|.:|||..:.:.|.::
Mouse   187 RAALAKALRMTDAQVKTWFQNRRTKWRRQTAEEREAERHR 226

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
pbNP_476669.3 Homeodomain 199..255 CDD:459649 25/55 (45%)
Tlx2NP_033418.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 20..52
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 78..104 7/25 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 140..166 6/28 (21%)
Homeodomain 158..214 CDD:459649 26/58 (45%)
Blue background indicates that the domain is not in the aligned region.

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