Protein Alignment pb and ceh-16

DIOPT Version :10

• Sequence 1: NP_476669.3
• Gene: pb / 40826
• FlyBaseID: FBgn0051481
• Length: 782
• Species: Drosophila melanogaster
• Sequence 2: NP_001379631.1
• Gene: ceh-16 / 191618
• WormBaseID: WBGene00000439
• Length: 187
• Species: Caenorhabditis elegans
• Alignment Length: 177
• Identity: 53/177 - (29%)
• Similarity: 75/177 - (42%)
• Gaps: 48/177 - (27%)

  Fly   118 SPKIGTPVGSGAIGGVGVNVNVNVGVGVGYPVGVVP--QTPDGMDSVPE--YP-WMKEKKTS--- 174
            ||.|.||..|                    |..:.|  .:|:|..::..  || |:...:.|
 Worm    19 SPTISTPATS--------------------PSSISPTFASPNGTPNIASSMYPAWVFSTRYSDRP 63

  Fly   175 ------RKSSNNNNQGDNSITEFVPENGLPRRLRTAYTNTQLLELEKEFHFNKYLCRPRRIEIAA 233
                  |||....:.|.:..:|      ..:|.|||:|..||..|:.||..::||...||.|:|.
 Worm    64 SAGPRHRKSRKRESTGSSGSSE------EEKRPRTAFTGDQLDRLKTEFRESRYLTEKRRQELAH 122

  Fly   234 SLDLTERQVKVWFQNRRMKHKRQT--------LSKTDDEDNKDSLKG 272
            .|.|.|.|:|:||||:|.|.|:.|        .|.|.:..|..|:.|
 Worm   123 ELGLNESQIKIWFQNKRAKLKKSTSSVPRDRCSSVTPNPHNHPSIHG 169

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
pb	NP_476669.3	Homeodomain	199..255	CDD:459649	27/55 (49%)
ceh-16	NP_001379631.1	Homeodomain	88..144	CDD:459649	27/55 (49%)